Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02549 ATGGCTTCGTTTTCAATTGGGACTCACTTGTCCACGTTCCACCATTTGCGTACCTCTAGACTTCCCCTTCACGGCCCTTGCGCAGTTGAATCCTCACCTTTCTTTGGCTCCTCTTCTTTCAGAGCTACCCCTCCCACGTTGCTCCGTCACAATGTATTGGCACGTGCTGAAGATAAGGCCAGAGTTCCTCCACCTTCTTCTTTTCAGCCTCAACAAAGTTCTCAGCAACAGTTTCAGAACTTGACACCAGAATCTGGAAATTGTGATCCCCTATGTTCACTTGATGAAACAAGTTCAAAAGAGTTTGAAGACAGCTACCAGCCCAAGACTGATTTGCTCAAAGCTGTTGCAATATTAGCAGCATCTGCAACTGGGGCTGTGGCAATTAACCATTCTTGGGTGGCCGCTAATCAGGATCTTGCTATGGCATTGCTATTTGTATTAGGATATGCAGGTATCATATTTGAAGAATCTCTAGCCTTCAATAAAAGCGGAGTGGGTCTGCTGATGGCTGTAAGCTTATGGGTGATACGGAGTATTGGGGCTCCATCAACTGAAATAGCTGTTTCAGAGCTTACACATGCATCTGCAGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATTGTTGATGCTCATCAAGGATTTAAGCTGGTTACTGACAATATAACTACCCGAAACCCACGCCTTCTTCTCTGGGTGATTGGATTTGTTACATTTTTTCTCAGTTCAGTTCTAGACAACCTGACATCCACCATAGTTATGGTTTCTCTGTTGCGGAAATTAGTACCTCCTTCAGAGTATCGAAAGATTCTTGGAGCTGTTGTTGTAATAGCAGCAAATGCAGGGGGTGCATGGACCCCTATTGGTGATGTTACAACTACTATGCTGTGGATACATGGCCAAATATCTACAGTTGAAACGATGAAGGGTTTATTTGTACCTTCAGCTATATCTCTAGCTGTTCCCCTGGCTCTAATGTCCCTGACTAGTGAAGTTAATGGGAAGGGACAAGATTCTCCCAATGTCTTGGCATCTGAACAGATAGCTCCTCGAGGACAGCTTGTTTTCTCGGTGGGTTTAGGAGCTTTGATTTTTGTGCCAGTGTTCAAGGCTCTCACAGGTTTGCCTCCGTACATGGGGATGTTGCTTGCACTTGGCGTGCTTTGGATCCTCACAGATGCTATCCATTACGGTGAATCTGAAAGGCAAAAGCTAAAGGTACCGCAGGCTCTCTCAAGGATAGACACTCAAGGAGTACTATTCTTCCTGGGAATTCTATTATCTGTTGGCAGCCTAGAGGCAGCAGGGATTCTTCGAGAAATAGCAAACTACCTTGATGCCCATGTCCCAAGTAGTGAACTGATTGCAAGTACTATTGGACTCATATCTGCAGTAATAGACAATGTTCCATTGGTTGCTGCAACAATGGGAATGTATGATGTCTCTTCTTTCCCTCAAGATTCTGAGTTCTGGCAATTGATTGCATTTTGTGCTGGTACTGGTGGATCAATGTTAATTATTGGTTCAGCCGCTGGAGTTGCGTTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTACTTACGGAAGATTAGTGGCTTTGCATTTGCAGGTTATGCTGCTGGTATCGTTGCTTATTTAGCACTTCATAACCCCAATATTTCCCTACCAACACTAGCGGAGCTTCCTTTCCTTTCTGGTTCATAA 1725 0.4435 MASFSIGTHLSTFHHLRTSRLPLHGPCAVESSPFFGSSSFRATPPTLLRHNVLARAEDKARVPPPSSFQPQQSSQQQFQNLTPESGNCDPLCSLDETSSKEFEDSYQPKTDLLKAVAILAASATGAVAINHSWVAANQDLAMALLFVLGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTEIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRNPRLLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVETMKGLFVPSAISLAVPLALMSLTSEVNGKGQDSPNVLASEQIAPRGQLVFSVGLGALIFVPVFKALTGLPPYMGMLLALGVLWILTDAIHYGESERQKLKVPQALSRIDTQGVLFFLGILLSVGSLEAAGILREIANYLDAHVPSSELIASTIGLISAVIDNVPLVAATMGMYDVSSFPQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKISGFAFAGYAAGIVAYLALHNPNISLPTLAELPFLSGS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02549 574 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 574 IPR045016 GO:0006814|GO:0015297
Cca02g02549 574 Pfam Citrate transporter 151 506 IPR004680 GO:0016021|GO:0055085
Cca02g02549 574 PANTHER BNAC03G40960D PROTEIN 1 574 - -
Cca02g02549 574 MobiDBLite consensus disorder prediction 59 87 - -
Cca02g02549 574 MobiDBLite consensus disorder prediction 65 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02549 Cca-Chr2 46625009 46630488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02549 1 574 Antiporters AT3G19490 75.517 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02549 - - gmx:100779521 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02549 02 46625009 46630488 Cca02g02549 02 46625009 46630488 ECH