Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02537 ATGAGCCTTAACTTCCAAAATCTCCATTTGTGGTGGAGAATCACATCCTTCCTTCTCCTACTTCTTCAATCTGCTAAATCTCTCAACTCTGATGGTATTCTTTTGCTTAAATTCAAATACTCCATCCTCAGTGACCCACTATCAGTCCTAGAGAGCTGGAACTACGATGATGTGACTCCATGTTCATGGCATGGTGTTACATGCACCGAAATTGGACCACCTGGTTCCCCTGGCTTGTTCAGAGTAACTAGTTTGGCCCTTCCCAATAGCCAACTTTTGGGTTCCATTTCTAAAGACTTAGGCATGATTCAACACCTTCGCCAAATCGATCTCTCCAACAATTTCCTCAACGGCTCTCTCCCCAACACTATCTTCAACTCTTCCCAACTTCAAGTGCTTTCCCTCTCAAACAATGTCATCTCAGGTGAACTACCTGAGCTGGTTGGTAACCTCACAAACCTTAAACTTCTCAACCTCTCAGACAACGCCTTTGCCGGGTTGATCCCAGAAAAGCTTCCTACTTTACCAAACTTAACCGTTGTTTCATTGAAGAGTAACTACTTTTCTGGCAGTGTCCCAACCGGGTTCAACCATGTAGAGATTTTGGATTTGTCCTCCAACTTGCTCAACGGTTCTCTGCCAAATGACTTTGGAGGCGAAAACTTGCGCTACTTGAACCTCTCCTACAACAAGATTTCGGGAACAATACCTCTAGCATTTGCAAAACAGATTTCTGGAAACACAACAGTGGATCTCTCATTCAACAATCTAACGGGACCAATACCAGGGTCTGAGGCTTTGCTCAACCAGAAGACAGAGTTTCTATCAGGGAATGCTGATCTCTGTGGTAAGCCTCTGAAGCTTCTTTGCACTGTTCCCTCTACTGCATCCACTGCTCCACTCAACGGCACCACATCTTCACCAGCAATTGCAGTCATGCCAAAAACAATTGACACAACACCTTCAACAAACACAACAGGAACCACCACCCAGAATGTCTCACCAAGTGGCCTAAAACCTTCCACCATAGCAGCCATTGTGGTAGGAGACTTAGCTGGCATGGCCCTTTTGGCCCTCATCATTCTCTTCATCTACCAACACAGGGAAAAAAGATACACAAATCCAAAACCAAACATGAATGCTTCTGTTTCCAGCAACTCAGAAAAGAAAGAGGAAACTGTTTCAAGACAAGTGGTAGATGTGAGAACAGTAACACTAACACCTTCTCTTCCGTGTTCCTGCTTAACAATCAAAGAAGAAGAAACTTCAGAGGCAACAAGCTCCGACAGTGACCGCGAGAGCAACACTGCGGTGGACATCATCGGCGCACAAAACGGGAACACTCTTGTAATCGTCGACGGTGAAACGAACCTGGAGCTAAAGACTTTGCTCAAGGCTTCAGCGTATATTTTGGGAAACAGCCACGTCAGCATTGTTTACAAGGCGGTGCTGGAGGATGGGAGAGCCTTTGCCGTTAGAAGGATCGGTGAGTGTAAGATTCAAAGAATGAAGGAGTTCGAGAACCAAGTGCGTGCCATTGCAAAGCTTCGCCACCCCAATTTGGTTAAGCTTCGTGGCTTCTGCTGGGGTCAAGATGATAAACTCCTAATATGTGACTATGTTCCCAATGGCAGCCTCGCTACCATGGGTTACAGAAGAGGAGGTACATGTTCTTTGAAATTGTCCTTGGAGGGGCGATTGAAGATAGCAAAAGGGGTGGCACGAGGATTGGCCTTCATTCACGAGAAGAAACACGTGCATGGCAACGTTAAACCGAGCAACATTCTATTAAACTCGGAAATGGAAGCCGTGATAAGCGATTTTGGGGTGGACCGGCTCCTGTTGAATGACGTCGCGATCGCCCACAGAGCAAACGGTTCGGCAAGACAACAAGAGCTAACATTGGGTTCAAGCCCCTACACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTACACGACAATGGGCTCATCGTCCAGTACGGTGGGCCTAATGGCCTATCAAGCACCAGAAACGTTTAAAAACATCAAGGCCAGCAACAAATGGGACGTGTACTCTTTCGGCGTGGTGTTGCTGGAGCTTCTAACTGGGAGGGTTTTGTTGGAGCGGGAGTTGGAACAGTGGCATGAACCGGGTTCGGTGGAAGAGGAGAAGAACCGGGTGTTGAAGATGGCTGACGTGGCAATAAAGTGTGACATGGAAACAAGAGAGAGTGTGTTATTGGCATGGTTCAAGTTGGGCCTCAGCTGTGCTTGTCCGGTCCCACAAAAGAGACCCTCCATGAAAGAGGCTCTACAAATCTTGGACAAGATCCATGCTGCTACCCTCAATTAA 2364 0.4585 MSLNFQNLHLWWRITSFLLLLLQSAKSLNSDGILLLKFKYSILSDPLSVLESWNYDDVTPCSWHGVTCTEIGPPGSPGLFRVTSLALPNSQLLGSISKDLGMIQHLRQIDLSNNFLNGSLPNTIFNSSQLQVLSLSNNVISGELPELVGNLTNLKLLNLSDNAFAGLIPEKLPTLPNLTVVSLKSNYFSGSVPTGFNHVEILDLSSNLLNGSLPNDFGGENLRYLNLSYNKISGTIPLAFAKQISGNTTVDLSFNNLTGPIPGSEALLNQKTEFLSGNADLCGKPLKLLCTVPSTASTAPLNGTTSSPAIAVMPKTIDTTPSTNTTGTTTQNVSPSGLKPSTIAAIVVGDLAGMALLALIILFIYQHREKRYTNPKPNMNASVSSNSEKKEETVSRQVVDVRTVTLTPSLPCSCLTIKEEETSEATSSDSDRESNTAVDIIGAQNGNTLVIVDGETNLELKTLLKASAYILGNSHVSIVYKAVLEDGRAFAVRRIGECKIQRMKEFENQVRAIAKLRHPNLVKLRGFCWGQDDKLLICDYVPNGSLATMGYRRGGTCSLKLSLEGRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLNSEMEAVISDFGVDRLLLNDVAIAHRANGSARQQELTLGSSPYTXXXXXXXXXXXXXXXXXXXPYTTMGSSSSTVGLMAYQAPETFKNIKASNKWDVYSFGVVLLELLTGRVLLERELEQWHEPGSVEEEKNRVLKMADVAIKCDMETRESVLLAWFKLGLSCACPVPQKRPSMKEALQILDKIHAATLN 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02537 787 Pfam Protein kinase domain 668 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02537 787 Pfam Protein kinase domain 470 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02537 787 SUPERFAMILY Protein kinase-like (PK-like) 470 781 IPR011009 -
Cca02g02537 787 SUPERFAMILY L domain-like 33 287 - -
Cca02g02537 787 CDD TM_EGFR-like 342 371 - -
Cca02g02537 787 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Cca02g02537 787 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 23 783 - -
Cca02g02537 787 PANTHER OS04G0122200 PROTEIN 23 783 - -
Cca02g02537 787 Gene3D Ribonuclease Inhibitor 28 196 IPR032675 -
Cca02g02537 787 Gene3D Ribonuclease Inhibitor 197 292 IPR032675 -
Cca02g02537 787 Gene3D Phosphorylase Kinase; domain 1 433 540 - -
Cca02g02537 787 Pfam Leucine rich repeat 176 232 IPR001611 GO:0005515
Cca02g02537 787 MobiDBLite consensus disorder prediction 312 336 - -
Cca02g02537 787 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
Cca02g02537 787 Gene3D Transferase(Phosphotransferase) domain 1 541 786 - -
Cca02g02537 787 ProSiteProfiles Protein kinase domain profile. 465 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02537 Cca-Chr2 46530184 46532953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02537 17 782 Receptor kinase-like Gene Family AT4G37250 47.898 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca02g02537 Pkinase 5.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02537 - - gmx:102667237 1142.87