Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02534 ATGCAGATGTTAGCGACAGTGGGATTAATTCTGAGTCTGTTAGTTGAGATTCAGAGCTTCCACCTCCCCTCCGGTTACCTCTGCTCCCTACATACGATTCGAACGAAGGATGGTTTCTTATTAGGTCTTTACCGCGTCtcttcttcttcttcttcttcttcttctCTAGGGTATGGAGAACGAGGCCATCCGGTTCTGCTTCTGCATATGGAAGGTGATGGTTGGTTCCTATATACTCCAGACCAATCTCTTGCTTTCATACTTGTGGATCATGGTTTTGATGTTTGGGTACGAAATGTGTGTGAAACACGCTCCAGCCACGGGGTACATTGGAGTTGGCAGGACCTTGTAGAGATGATGAAGTACATTAATTCCGTAACAAACTCAAAGCTATTTGTACTCGGACATTCACAGGGTAAAAGTTTCGCTGTCTTCACTCAACTGGAGATAGCAGAAAAGGTTGAAGCTGCAGCTCTTGGACTTGCCAAGGACATTCAACAACTGAACCACAAAAGAACCAGGTTCAAAAGTACCACTCCCACATTGCTTCATCATAATGATTTGGCACATGCTGAAGCTAAGGCCAAAAATCCTACACTTTCTTCGTTTCAGCCTCAACAAACTTCAAGGCAACAATTTCAGGATATTGCTATGGCTTTGCTATTTGTAATAGGATATGCAGGCATCATATTAGAACAATATCTAGCCTTCAATAAAAGCGGAGTGGGACTGTTGATGGCTGTAAGCTTATGGGTGGTTCGGAGTATTGGGGCTCCATCAACTGATATAGCTGTTTCAGAGCTAATCTATGCATCTGCGGAAGTCGGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGGTAGTTGACGTTCATCAGGGATTTAAGCTGGTTACAGACAATATAACGACCCGAAGCCCACGCCTTCTCCTGTGGGTGATTGGATTTGTTACATTCTTTCTCAGTTCAGTTCTAGACAGTCTGGCATCCACCATAGTCATGATTTCTCTGTTGCGGAAATTAGTACCTCCAACAGAGTATCAGAAGATTTTGGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGTGGTGCATGGAGTCCTATTGGTGCTGTTACCACCACTATGCTGTGGATACATGGTCAAATATCAGCTTTGCAAACAATAAAGGGTTTGTTTGTACCTTCAGTCATTTCTCTAGCTGTTCCTCTGGTTTTGATGTCCCTGACTAGTGGAGTCAATGGGAAGGGACAAAATTCTCCTGACGTCTTTGCCTCTGAACAAATTGCTCCTCGAGGGCAGCTTGTTTTCTCAGTGAGTTTTGGAGCTTTAATTTTTGTGCCAGTGTTCAAGGCCCTCACAGGTTTACCTCCGTACATGGGAATGCTGCTTGGACTTGGCGTGCTTTGGATCTTCACTGATGCTATCCACTATGGTGAATCTGAAAGGCAGAAGCTAAAAGTGCCACAGGCTCTGTCAAGGATAGACACTCAAGGAGCACTATTTTTCCTGGGAATTCTATTATCCGTTAGTAGCCTGGAGGCAGCAGGGATTCTTCGGGAAATAGCAAATTACTTTGATGCACGTGTTCCAAGTAGTGAACTTATTGCAAGTGCTATTGGAATGATATCTGCAGTAATAGACAATGTTCCATTGGTTGCTGCAACAATGGCAATGTATGATGTCTCTTCTTTCCCTCAAGATTCTGAGTTCTGGCAATTGATTGCATTATGTGCTAGTACTGGTGGATCAATATTAATTATTGGCTCAGCTGCTGGAGTTGCATTCATGGGGATGCAAAAGGTGGACTTTGTTTGGTACTTACGGAAGGTTAGTGGCTTTGCCTTAGCAGGGTATGCTGCTGGTATTGCTACCTATTTAGCGCTTCATAAACTCAACATCTCCCAACCAACCCCAACTGAGGTTTCTTCCCTTTCTAATTCCTAA 1953 0.4316 MQMLATVGLILSLLVEIQSFHLPSGYLCSLHTIRTKDGFLLGLYRVSSSSSSSSSLGYGERGHPVLLLHMEGDGWFLYTPDQSLAFILVDHGFDVWVRNVCETRSSHGVHWSWQDLVEMMKYINSVTNSKLFVLGHSQGKSFAVFTQLEIAEKVEAAALGLAKDIQQLNHKRTRFKSTTPTLLHHNDLAHAEAKAKNPTLSSFQPQQTSRQQFQDIAMALLFVIGYAGIILEQYLAFNKSGVGLLMAVSLWVVRSIGAPSTDIAVSELIYASAEVGEIVFFLLGAMTIVEVVDVHQGFKLVTDNITTRSPRLLLWVIGFVTFFLSSVLDSLASTIVMISLLRKLVPPTEYQKILGAVVVIAANAGGAWSPIGAVTTTMLWIHGQISALQTIKGLFVPSVISLAVPLVLMSLTSGVNGKGQNSPDVFASEQIAPRGQLVFSVSFGALIFVPVFKALTGLPPYMGMLLGLGVLWIFTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYFDARVPSSELIASAIGMISAVIDNVPLVAATMAMYDVSSFPQDSEFWQLIALCASTGGSILIIGSAAGVAFMGMQKVDFVWYLRKVSGFALAGYAAGIATYLALHKLNISQPTPTEVSSLSNS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02534 650 Pfam Citrate transporter 228 580 IPR004680 GO:0016021|GO:0055085
Cca02g02534 650 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 162 645 IPR045016 GO:0006814|GO:0015297
Cca02g02534 650 SUPERFAMILY alpha/beta-Hydrolases 24 139 IPR029058 -
Cca02g02534 650 Gene3D alpha/beta hydrolase 14 228 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02534 Cca-Chr2 46506914 46515301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02534 214 640 Antiporters AT3G19490 81.499 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02534 - - gsj:114401198 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02534 02 46506914 46515301 Cca02g02534 02 46506914 46515301 ECH