Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02481 ATGGGATTCCCTGCTGGTGACTTGAGCTCTGGGTTTTTCAGTTATGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTGATCAAGTTTTTTGAAACTCACCATAAGAGGACTGATGCTGGACCTGTTGTCTCATGGTCAAAGTTGAAAGTTATATGCAAGAAGGCACCTGAGGATTTTAAGCAACATGGCGGGATCAAACATTTTGGGCAGGCCACTCCTTTGCTTCTTATTGTAGCTGTTATCAAGCTTAGTGACATTGCATTTGCAAACGCTGCAGCTTCAATCGGGTTATATCTTGACTGTGGTTCCATCCATGAGACCCCATTGTCAAGTGGGGCTTCACACTTGCTAGAGCGAATGGCTTTCAAAAGCACAACAAACCGTAGTCACTTCCGTATTGTAAGGGAAGTAGAAGCAATTGGTGGTAATGTAGGAGCCTCTGCCTCTCGTGAGCAAATGGGTTATACATTTGATGCCTTGAAGACTTATGTTCCACAAATGGTTGAATTACTGGTTGACTGTGTAAGGAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTTCGAAAGGTGAAAGCAGAGCTTGGAGAACTCTCTAACAATCCCCAGGGCTTGCTTTTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTTTTGGCTCCTGAAGCAGCACTGAACAGATTGGACGGCGCCATTTTAGAGGAATTTGTTGCTGAGAATTACACAGCACCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCACGAAGAGCTTCTATCTGTTGCTGAACCACTTCTCTCTGATCTACCAAAAGTTCCTCGTCCTGAAGAACCAAAATCTATCTATGTTGGGGGTGATTTTCGTCGTCATGGTGAATCAGCGGGTACACATGTTGCTATTGCTTTTGAAGTGCCTGGCGGCTGGCAAACAGAGAGAGATGCTATTGTTTTGACTGTTTTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCCGCAGGGGGCCCAGGAAAAGGGATGCACTCAAGGCTATATCTTCGTGTGCTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGTATCTTCAATAATACAGGACTATTTGGCATTTATGCAAGCACTCTTCAACCAGAAGATACTGTTTGGTCAGGGCGACCTAATGCTAAGGCTTCCAATTTCTACATAAATCCACCCACTTCACCTCCTGCTAAGGAGATTGATGAACAAGCTTCTGCTTCTGTAGTCTCTGGGCAAGATAATTCTGCACATGATGCATCATCTAGGCTATCTCCGACTGGCATATCGTCTTGGGCCAAATTGAAAATTTCTCAGCCATTTACTGGCTCCCAAGATGACTCGTCAAGTGGGAATGCTGGGAAATCAACTTTTGCACGCATCACTAGTAATTTGGGGTTGAGGTTGTCCCCAAAATCTCCTGTGGCAGATGACAGTTCCAATGAAACAGCTGTACAATCTAATTTGTTTGGAACTATCACGAAAGGCCTGGTTGACTCTTCTAAGAATGCAGTGAAAGCTGTGCAGGTTAAAGCACGCCATGTTGTTTCACAGAATAAACGCAGATACCAGACATGTCCACAACAGGGTGAAGAAGACAATTATGATGCACAGCATATTGGGAAGTTCCACTTTGGGCAGGTTCCATGTTTACTCCTACATTGCTTGTATTGTTGCACAATGCACTGCAACAAGGGATAA 1743 0.4418 MGFPAGDLSSGFFSYVEGFYRNHMEEVIKFFETHHKRTDAGPVVSWSKLKVICKKAPEDFKQHGGIKHFGQATPLLLIVAVIKLSDIAFANAAASIGLYLDCGSIHETPLSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNVGASASREQMGYTFDALKTYVPQMVELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALAYPLLAPEAALNRLDGAILEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPKVPRPEEPKSIYVGGDFRRHGESAGTHVAIAFEVPGGWQTERDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTLQPEDTVWSGRPNAKASNFYINPPTSPPAKEIDEQASASVVSGQDNSAHDASSRLSPTGISSWAKLKISQPFTGSQDDSSSGNAGKSTFARITSNLGLRLSPKSPVADDSSNETAVQSNLFGTITKGLVDSSKNAVKAVQVKARHVVSQNKRRYQTCPQQGEEDNYDAQHIGKFHFGQVPCLLLHCLYCCTMHCNKG 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02481 580 SUPERFAMILY LuxS/MPP-like metallohydrolase 303 385 IPR011249 GO:0046872
Cca02g02481 580 Pfam Peptidase M16 inactive domain 240 383 IPR007863 -
Cca02g02481 580 Pfam Insulinase (Peptidase family M16) 92 228 IPR011765 -
Cca02g02481 580 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 81 383 IPR037715 GO:0006627
Cca02g02481 580 Gene3D - 79 275 - -
Cca02g02481 580 MobiDBLite consensus disorder prediction 401 439 - -
Cca02g02481 580 PANTHER METALLOPROTEASE 81 383 - -
Cca02g02481 580 MobiDBLite consensus disorder prediction 420 439 - -
Cca02g02481 580 SUPERFAMILY LuxS/MPP-like metallohydrolase 93 282 IPR011249 GO:0046872
Cca02g02481 580 ProSitePatterns Insulinase family, zinc-binding region signature. 103 126 IPR001431 GO:0004222|GO:0006508
Cca02g02481 580 Gene3D - 287 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02481 Cca-Chr2 45932328 45952413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02481 425 538 Protein tyrosine phosphatase (PTP) family AT3G19420 61.017 3.13e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02481 K01412 - gmx:100794691 538.495