Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02476 ATGCTTCGGAGGAAGGGAAGTGCGGCAAGAACATGGTTGGTGTTGGACGGAGAGGGGAAGAGAAAGGTGGTGGAGGCAAGTAAGCAAATTATCATGCGGCGAACGGGTGTGTCTACTAGGGACCTACGAGTTTTGGACCCTTTGTTGTCATACCCTTCAACCATTGTGGGGCGTGACAGAGCCATGCTCATCAACTTGGAACACATCAAAGCCATCATCACTGCTCATGAAGTTCTCTTGCTCAATTCCACTGACCACTCTGTTGTCCCTTTTGTTCAACACCTTCACCAAAGGATTCTCACTCACCACCGTGCCACTCAACAACAACCTCAGGAGGATCGAGATGAAACAAAGCAATTGGATGACATGAAGATTCTCCCATTTGAGTTTTTGACACTAGAGGCATGCCTTGAGGCTGCTTGTACTGCCTTAGAAAATGAGGCAGAGATATTGGAGCAGGAGACTTATCCCGCCTTAGATAAACTAACATCAAAGATCAGTACTCTCAATTTGGAAGGCATTCGTCTTGTTAAGAGTCGCTTAGTTGCCTTAGCTGCTCGTGTTCGAAGGATAAGGGATGAATTAGAGCACTGGCTAGATAACAATGAAGATATGGCTGAACTGTATTTGACAGAGAAGTTAGTTCAACAGCAGCTTGAAAACTCCACCACCTTGTCCATGAATGACATGGAATATGAAGTTCTTCATCCAGATATAAATGACAGGATTCCTCCTGAAATATCATTGGAACGGGGTGGAGATTCTGCTAGTGATGATGAAGATGATCAAAATGCTGGCACCGACGAGAGTGCTGAAACCAAGAACACTTTTGATGTGGAGGAGCTTGAGATGCTCTTGGGAGCATACTTTGTGCAAATCGGTGGCACATTGAACAAACTATCTAGGCTGAGAGAGTACGTGGATGACACAGAAGACTACATAAACATTGCGTTGGATGAGAAACAAAATCGGCTGCTGCAAATAGGAGTGAAGTTTAGCACATCAAAGGTGCTTTTGAGTGCCTTTATTTGTGTGACTGCTATATTTAGCATCAATATTCATATTGACCTATTTGATACTGGGATGCCACAATTCCTCGCCACTTGTTTTGGAGGCACTGCTGCTTGCATTTTCATCTATTTCGTTGCCATTACTTGGTTCAAGCACCAAGGCTTGGTGGACTAG 1185 0.4447 MLRRKGSAARTWLVLDGEGKRKVVEASKQIIMRRTGVSTRDLRVLDPLLSYPSTIVGRDRAMLINLEHIKAIITAHEVLLLNSTDHSVVPFVQHLHQRILTHHRATQQQPQEDRDETKQLDDMKILPFEFLTLEACLEAACTALENEAEILEQETYPALDKLTSKISTLNLEGIRLVKSRLVALAARVRRIRDELEHWLDNNEDMAELYLTEKLVQQQLENSTTLSMNDMEYEVLHPDINDRIPPEISLERGGDSASDDEDDQNAGTDESAETKNTFDVEELEMLLGAYFVQIGGTLNKLSRLREYVDDTEDYINIALDEKQNRLLQIGVKFSTSKVLLSAFICVTAIFSINIHIDLFDTGMPQFLATCFGGTAACIFIYFVAITWFKHQGLVD 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02476 394 Coils Coil 134 154 - -
Cca02g02476 394 PANTHER MAGNESIUM TRANSPORTER MRS2-3 8 393 - -
Cca02g02476 394 MobiDBLite consensus disorder prediction 242 273 - -
Cca02g02476 394 CDD Mrs2_Mfm1p-like 12 392 IPR039204 -
Cca02g02476 394 Gene3D - 2 84 - -
Cca02g02476 394 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 8 393 IPR039204 -
Cca02g02476 394 Gene3D Magnesium transport protein CorA, transmembrane region 85 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02476 Cca-Chr2 45912975 45915015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02476 11 394 MRS2 Gene Family AT3G19640 51.136 4.75e-138 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02476 - - aprc:113872466 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02476 02 45912975 45915015 Cca02g02476 02 45912975 45915015 ECH