Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g02458 | ATGGTTGTGTTTTCATCAAGGCTACTTTTTTCCTTTCTTTGTAATATTCTTCTCATAACAATTTCTATATCTCAAGTTAGCGCCGCTAACACTACACAAGACTACCAATACTTCTGTGATTTTACCAACAGAGGAAACTACACAGCCAACAGCACATACCACACGAACCTCAACACCCTTTTGTCCACTCTCATTTCCAATACAGAAATCGACTATGGTTTCTACAATTTCACAAACGGCGAAAACACTGACAAAGTGTACGCCATTGGGCTGTGCAGAGGAGATGTTAAGCCAGAAGAATGCCGCAGTTGTCTCAACGGTTCCAGGGCCAATCTCACACAGCTTTGTCCAAACAGAAAGGAAGCAATTGGGTGGTACGAGAATGAGAAATGCATGTTGCGCTACTCAGATCGCTCAATATTTTCCCTCATGGAAACTGGACCTGCGTATTATGCTCACAACACGATAAATGCAACGGACTTGGATCAGTTCAATCGAAGTCTCAGCTCGTTGCTGCGTGACTTGAAAAGCCAAGCTGCATCAGGTGACTCTCGTCTTAAGTATGGCGTAGGAAATATATCTATTCCTGATGACAAGGTCATATATGGTCTTGTTCAGTGCACACCGGACTTGTCAGGCTCAGATTGCGATGATTGCTTGGCTCAGTCCATTGAACGTATCCCAATAGATTGTTGTAAAGATAGCAAAGGTGGTAGGGTTGTTAGACCCAGTTGTAGCATGAGGTTTGAAACCTCGTACCATTTTTATGGACCTACAGCATATACACCGCCACCCTCCACCAGCACCACCTCAGAAGGAAGCAACACAATTACCATTGCCATAGCAGTTGCAGTACCAGTTTTCGTAGTTGTTGCGGTGCTCATTTTTATCTGCATCTATTTTAGAGCAAGGAAGCCAGGGAAGAAGTATAAAACTCAACAACAAGAAGAACATGATGATGATGAAATTGACATTTCTGAGTCATTGCAATTCAGCTTTAACACCATACGAGAAGCTACTGATAACTTTTCTGATTCTAATAAACTCGGACAAGGTGGATTTGGGGCTGTTTACAAGGGTAGGCTCTCCAACGGACAAGAGATTGCTGTCAAAAGGCTATCAGCGGATTCTAGACAAGGAGATACAGAATTCAAGAATGAAGTGCTTTTAGTGGCCAAGCTTCAGCACCGGAATTTAGTTAGGCTACTTGGTTTCTGTTTGGAAGGAAGGGAAAAACTACTTGTCTATGAATTTGTTCCAAATAAAAGCCTTGATTACTTCGTATTCAATCAGACTAATAGAGCACAATTAAATTGGGAAACACGCTACAAGATTATTGGAGGTACTGCTCGAGGCATTCTCTACCTCCATCAGGATTCTCGATTGCGCATTATTCATCGTGATCTCAAAGCAAGTAACATTCTTTTAGACGAAGAAATGAATCCTAAAATATCAGATTTTGGTTTAGCAAAATTATTTGTTGTGGATCAAACTCATGGAGATACAAATAGAATTGTTGGAACCTATGGATACATGGCACCTGAATATGCAATGCATGGACAGTTTTCAGAAAAGTCTGATGTTTTTAGTTTTGGTGTATTGGTTCTTGAGATTGTTAGTGGCCAGAGAAATAGTGGCATTAGTCATGGAGAGAATATAGAGGATCTACTAAGTTTTGCATGGCGAAACTGGAGGGAAGGCACTCCTAGAAATATTGTAGATCCCACATTAAACAACAGTTTTCAAAATGAAATAATGAGATGCATTCACATTGGACTACTCTGCGTTCAAGAAAATGTGTCTGCCAGACCCACTATGGCTTCCGTTGTACTCGTGCTTAATAGTCATTCTCTCACTCTCCCAGTACCATTAGCACCTGCATTTTATGTGGATAGTAGAACTGGAAACCTTCCAGACATGCACTTATGGGAGTTTAATTCGAGAACCACAGGATCAAGCGAATACACATCGATTAACGAGGCTTCAATTACTGAGCCATATCCTCGTTAG | 2010 | 0.4119 | MVVFSSRLLFSFLCNILLITISISQVSAANTTQDYQYFCDFTNRGNYTANSTYHTNLNTLLSTLISNTEIDYGFYNFTNGENTDKVYAIGLCRGDVKPEECRSCLNGSRANLTQLCPNRKEAIGWYENEKCMLRYSDRSIFSLMETGPAYYAHNTINATDLDQFNRSLSSLLRDLKSQAASGDSRLKYGVGNISIPDDKVIYGLVQCTPDLSGSDCDDCLAQSIERIPIDCCKDSKGGRVVRPSCSMRFETSYHFYGPTAYTPPPSTSTTSEGSNTITIAIAVAVPVFVVVAVLIFICIYFRARKPGKKYKTQQQEEHDDDEIDISESLQFSFNTIREATDNFSDSNKLGQGGFGAVYKGRLSNGQEIAVKRLSADSRQGDTEFKNEVLLVAKLQHRNLVRLLGFCLEGREKLLVYEFVPNKSLDYFVFNQTNRAQLNWETRYKIIGGTARGILYLHQDSRLRIIHRDLKASNILLDEEMNPKISDFGLAKLFVVDQTHGDTNRIVGTYGYMAPEYAMHGQFSEKSDVFSFGVLVLEIVSGQRNSGISHGENIEDLLSFAWRNWREGTPRNIVDPTLNNSFQNEIMRCIHIGLLCVQENVSARPTMASVVLVLNSHSLTLPVPLAPAFYVDSRTGNLPDMHLWEFNSRTTGSSEYTSINEASITEPYPR | 669 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g02458 | 669 | PANTHER | CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN | 13 | 656 | - | - | |
Cca02g02458 | 669 | Gene3D | Transferase(Phosphotransferase) domain 1 | 419 | 619 | - | - | |
Cca02g02458 | 669 | Gene3D | Phosphorylase Kinase; domain 1 | 304 | 418 | - | - | |
Cca02g02458 | 669 | ProSiteProfiles | Protein kinase domain profile. | 343 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g02458 | 669 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 464 | 476 | IPR008271 | GO:0004672|GO:0006468 | |
Cca02g02458 | 669 | ProSitePatterns | Protein kinases ATP-binding region signature. | 349 | 371 | IPR017441 | GO:0005524 | |
Cca02g02458 | 669 | SMART | serkin_6 | 343 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g02458 | 669 | ProSiteProfiles | Gnk2-homologous domain profile. | 35 | 140 | IPR002902 | - | |
Cca02g02458 | 669 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 13 | 656 | - | - | |
Cca02g02458 | 669 | SUPERFAMILY | Protein kinase-like (PK-like) | 331 | 649 | IPR011009 | - | |
Cca02g02458 | 669 | Pfam | Salt stress response/antifungal | 157 | 251 | IPR002902 | - | |
Cca02g02458 | 669 | Pfam | Salt stress response/antifungal | 39 | 137 | IPR002902 | - | |
Cca02g02458 | 669 | ProSiteProfiles | Gnk2-homologous domain profile. | 146 | 254 | IPR002902 | - | |
Cca02g02458 | 669 | Pfam | Protein tyrosine and serine/threonine kinase | 346 | 610 | IPR001245 | GO:0004672|GO:0006468 | |
Cca02g02458 | 669 | CDD | STKc_IRAK | 349 | 614 | - | - | |
Cca02g02458 | 669 | Gene3D | - | 34 | 139 | IPR038408 | - | |
Cca02g02458 | 669 | Gene3D | - | 147 | 254 | IPR038408 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g02458 | Cca-Chr2 | 45742083 | 45746015 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g02458 | 7 | 669 | Receptor kinase-like Gene Family | AT4G21410 | 49.928 | 0.0 | 625 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Cca02g02458 | PK_Tyr_Ser-Thr | 3.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g02458 | - | - | var:108324787 | 923.694 |