Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02451 ATGGTCTCTCGAAGAGTTCTTTCTTTTCTTTGTCTCCTTGTTACTCTGATATCTCAGGCTATTGCCAAGCCACAATACCAATACGCTGTCTGCATCACAGAAGGTGAAGATTATGCCCCTAATAGCACCTACCACACCAACCTCAAAACCGTTCTCTCAAGGCTCACTTCCAACACACAGATAGACTATGGCTTCTACAATGCCACCTATGGCCAAGACTCTGATAGAGTCTACGCGAGTGGTATTTGCAGAGGAGATGTTACCCCACATGCTTGCCTTACTTGCCTCAACAATTCTACTTCCCTTCTCCTAAAGCAGTGTCCACATCAGAAGCGTGTAGCAGGAGGATATGATGAATGCATGTTACACTATTCAAATCGCTCAGTCTTAGGTTACTATGATTCTGATTTCCGGGTCTACTTGCAGAGTAAAAATAATGTAGCAGATTGGAATAAGTACAGTTATGTGCTCAACAAGTTGCTGTCAAGACTAAGAGTGAAAGCTTCTACAGCTGACCCCAATCTGAATCGTAAATATGCTTCTGGAAATGCGACAGGTCCGAATTCTAAAACTATATATGCTAATGTTCAGTGCGACCCGGATTTGACAGTGGCACAATGCAACGATTGCTTAGATGGAGCCTTTTCAGAAATACCAAATTGTTGTGATAACATGTCAGGTGGGATGGTTATTAAGTTTAGCTGTAACTTCAGATATGAGAACTACAGCTTTTATAAGCCGACGCCTGATACATTAACACTACAATTGTCGCCACAAGGAGCTTCTCCTCCTTCCCCTGCACCATCAACCACTGCAAATTCCTCAGAGAGTACTTATCATGGAAAAAGCAACAAATCAAAAGCTGTCATTGCCAAATACGTTGTGCCTATTGTTGTCTTTGCTGGCTTGCTGATTTTTATTTGTATCTATTTAAGAGTGAGGAAGCGAACGAAACATTTTAAGAGTGAAGCTAAGGTTGATGATGAAATTAAAGAAGTAGAGTCATCACAATTTGACTTTGACACCATTATAGTTGCTACAAACAATTTCTCAGTTGCAAACAAGCTTGGACGAGGTGGATTTGGACCTGTTTACAAGGGGATGCTCTTCAATAAACAAGAGGTAGCAATCAAAAGGTTATCTAGCTACTCTGGCCAAGGAGATATTGAATTCAAGAATGAAGTGCTATTAATGTCAAGGCTTCAGCACCGAAATTTAGTTAGGCTCCTTGGTTTCTGTATTGAAAGAGAAGAACGTCTCCTTGTCTATGAGTTTCTTCCCAATAAAAGCCTTGACAACTTTTTATTTGATCCCATGAAGCGCGCACAtttggattggaaaaagcgctacaaaataattgaaggcattgcacatggccttctttatcttcatgaggattctcagccgaggattgttcaccgtgatcttaaatcaagtaatattcttttagatgccgacatgaatcctaagatttcagattttggtttggcaaGACTGTTTGTTGCAGATGAAACTCAGATTAAAGCAAGTAAAATTGCTGGAACCTACGGATACATGGCACCTGAGTATGCGAGGCATGGAAAACTCTCGACGAAGTTAGATGTCTTCAGTTTTGGTGTAATAATACTAGAGATCGTAAGTGGCCAAAAAAATAATGGATTTCGAAATGGAGAGAATGTGGAACATCTATTAAGCTTTGCTTGGAAAAACTGGAAGAAAGGGACAGCAGCTAATATAATAGATCCCACCTTGAATAATGCATTGAGAGATGAAATAGTTAGATGCATTCACATTGGGTTACTTTGTGTTCAAGAAAAGGTTTCTGATAGACCAACAATGGCTTCAGTGGTGCTTATGCTTGATAGACACTCTGTTGCTCTACCAGTTCCATTGAAACCTGCCTATTTTATGAACAATAGTTGTTTATCAGTCGTCCAGTTTTCGAGGTGCAGTTCTGTGGAAGCAGGATCAAATGAGCAGAAAAGTGTCTCTGCTGATGCATCAGCAAATGAGGCTTCAATTAGTAGCCTATATCCTCGTTAG 2043 0.373 MVSRRVLSFLCLLVTLISQAIAKPQYQYAVCITEGEDYAPNSTYHTNLKTVLSRLTSNTQIDYGFYNATYGQDSDRVYASGICRGDVTPHACLTCLNNSTSLLLKQCPHQKRVAGGYDECMLHYSNRSVLGYYDSDFRVYLQSKNNVADWNKYSYVLNKLLSRLRVKASTADPNLNRKYASGNATGPNSKTIYANVQCDPDLTVAQCNDCLDGAFSEIPNCCDNMSGGMVIKFSCNFRYENYSFYKPTPDTLTLQLSPQGASPPSPAPSTTANSSESTYHGKSNKSKAVIAKYVVPIVVFAGLLIFICIYLRVRKRTKHFKSEAKVDDEIKEVESSQFDFDTIIVATNNFSVANKLGRGGFGPVYKGMLFNKQEVAIKRLSSYSGQGDIEFKNEVLLMSRLQHRNLVRLLGFCIEREERLLVYEFLPNKSLDNFLFDPMKRAHLDWKKRYKIIEGIAHGLLYLHEDSQPRIVHRDLKSSNILLDADMNPKISDFGLARLFVADETQIKASKIAGTYGYMAPEYARHGKLSTKLDVFSFGVIILEIVSGQKNNGFRNGENVEHLLSFAWKNWKKGTAANIIDPTLNNALRDEIVRCIHIGLLCVQEKVSDRPTMASVVLMLDRHSVALPVPLKPAYFMNNSCLSVVQFSRCSSVEAGSNEQKSVSADASANEASISSLYPR 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02451 680 Pfam Protein tyrosine and serine/threonine kinase 352 618 IPR001245 GO:0004672|GO:0006468
Cca02g02451 680 ProSiteProfiles Protein kinase domain profile. 350 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02451 680 Gene3D Phosphorylase Kinase; domain 1 311 425 - -
Cca02g02451 680 ProSiteProfiles Gnk2-homologous domain profile. 135 244 IPR002902 -
Cca02g02451 680 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 645 - -
Cca02g02451 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Cca02g02451 680 CDD STKc_IRAK 356 622 - -
Cca02g02451 680 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
Cca02g02451 680 SUPERFAMILY Protein kinase-like (PK-like) 333 620 IPR011009 -
Cca02g02451 680 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Cca02g02451 680 MobiDBLite consensus disorder prediction 658 680 - -
Cca02g02451 680 MobiDBLite consensus disorder prediction 255 281 - -
Cca02g02451 680 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Cca02g02451 680 Pfam Salt stress response/antifungal 145 242 IPR002902 -
Cca02g02451 680 Gene3D - 25 128 IPR038408 -
Cca02g02451 680 Gene3D - 134 244 IPR038408 -
Cca02g02451 680 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 645 - -
Cca02g02451 680 SMART serkin_6 350 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02451 Cca-Chr2 45624133 45633969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02451 4 680 Receptor kinase-like Gene Family AT4G21410 45.559 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca02g02451 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02451 - - gmx:100790058 1093.18