Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02448 ATGCTTGCCTCTAAATTTTCTACAACCTCGTTTGTACTTCTATGTCTGTTTTGCATGCTCTTTCATGCAAGTGAATCAGCAGCACCCATTTACAGTGCCCACTTCTGCAGCAACGGAACCTTTTACCAACCCAACACAACATTTCAGTCCAACTTGAATACCcttctctcttctctcacctccaactcctcccttctctcCAACAACGGTTTCTACAGAACCTCCGTGAGCCAAGACACCCCCGACGACATCGACGGCCTTTTCCTCTGCCGTGGCGACATCAACGCCACCGTCTGCCACGGCTGCGTCGCCGCCGCAGCCACCAACATAACGCGCCTCTGTCCCGACGCCACGGAGTCCTTCATCTGGTACGACGTTTGCATGCTAAGTTACTCCAACAGCACCTTTGACAATGATAACATGGTTCCCTCATTTTCCTTGAAAGATGGAGAAAGCATCATTGACTCGAACCTTGACCGTTTCAATCAATTGTTGGCGAGCTTGCTAAGCAGTTTGGCAGAAGAAGCCGGGGCGAGTTCGGCGCCGGAGAAGAAGTTTGCCGCGGGTGAGGTGAGTGTGTCGAGCACACAGACGCTGTACGGAATGGCACAGTGCGTGCCTGACTTAACAAGCGCTACCTGTGTCAGGTGCTTAGAAAGCGCTATTGCAAATATTCCCACGTGTTGTGATGGAAGTGAAGGAGCAAAGTTTCTGCTTCCGGTATGTAATATCAGATACCAACTCGATCCCTTTTTGTACAATACAACTTCCATCACGCCACTTCTTCCTTCCCCTTCTTCAGGTAGCAAATATACTTTGATGGTGGTGGCAATTGTTATCCCAATTGCTATTTTGGCCGTGCTTTTGGTTATAGGATGTTGTTGGTGGAGAAGAAGGCCAAACAAAAACCATGTGGCTGTCCTGGAAGTGAATGATAGCATGAGAAAGTATTTGACAAGTGACGAAGAGTCTTTGCATTTTGACTTGACTACAATTGAAGCTGCTACAGATAGGTTCTCAAATGAGATGAAGATTGGAGAAGGTGGATTTGGCATGGTTTATAAGGGTACCTTTCCTAATGGACAAGAAATAGCTGTGAAGAGACTATCGAGAACCTCGCTCCAAGGTGACAGAGAATTCAGGAACGAAGCTTCACTTGTTGCACAGCTTCAACACAGAAATTTAGTTAGACTGTTAGGATTTTGCTTGGAGGGAACGGAGAGGATTCTAGTTTATGAATATATCCCAAATTCTAGCCTCGATCACTTTCTGTTTGGTCATGAAGACCATGCAGAGTTAGATTGGGCAAGACGATACAACATTATAATTGGGATTGTTAGAGGAATTCAATATCTCCATCAAGATTCTAGATTAAGAATAATACATCGTGATCTCAAGGCTAGTAATATTCTATTAGATGCTGATATGAATCCAAAAATTTCAGATTTTGGAATGGCAAAAATTTTTCATGAAGATCAAACTCAAGAAAACACAAGAACAAGAAGGATAGTTGGAACATAG 1521 0.432 MLASKFSTTSFVLLCLFCMLFHASESAAPIYSAHFCSNGTFYQPNTTFQSNLNTLLSSLTSNSSLLSNNGFYRTSVSQDTPDDIDGLFLCRGDINATVCHGCVAAAATNITRLCPDATESFIWYDVCMLSYSNSTFDNDNMVPSFSLKDGESIIDSNLDRFNQLLASLLSSLAEEAGASSAPEKKFAAGEVSVSSTQTLYGMAQCVPDLTSATCVRCLESAIANIPTCCDGSEGAKFLLPVCNIRYQLDPFLYNTTSITPLLPSPSSGSKYTLMVVAIVIPIAILAVLLVIGCCWWRRRPNKNHVAVLEVNDSMRKYLTSDEESLHFDLTTIEAATDRFSNEMKIGEGGFGMVYKGTFPNGQEIAVKRLSRTSLQGDREFRNEASLVAQLQHRNLVRLLGFCLEGTERILVYEYIPNSSLDHFLFGHEDHAELDWARRYNIIIGIVRGIQYLHQDSRLRIIHRDLKASNILLDADMNPKISDFGMAKIFHEDQTQENTRTRRIVGT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02448 506 Gene3D Transferase(Phosphotransferase) domain 1 415 506 - -
Cca02g02448 506 ProSiteProfiles Protein kinase domain profile. 339 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02448 506 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Cca02g02448 506 Gene3D Phosphorylase Kinase; domain 1 301 414 - -
Cca02g02448 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Cca02g02448 506 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 506 - -
Cca02g02448 506 SMART serkin_6 339 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02448 506 ProSiteProfiles Gnk2-homologous domain profile. 30 136 IPR002902 -
Cca02g02448 506 Gene3D - 29 136 IPR038408 -
Cca02g02448 506 Gene3D - 150 251 IPR038408 -
Cca02g02448 506 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 506 - -
Cca02g02448 506 Pfam Protein kinase domain 340 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02448 506 ProSiteProfiles Gnk2-homologous domain profile. 141 251 IPR002902 -
Cca02g02448 506 SUPERFAMILY Protein kinase-like (PK-like) 320 506 IPR011009 -
Cca02g02448 506 Pfam Salt stress response/antifungal 36 133 IPR002902 -
Cca02g02448 506 Pfam Salt stress response/antifungal 159 247 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02448 Cca-Chr2 45562717 45566386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02448 9 506 Receptor kinase-like Gene Family AT4G05200 45.261 2.66e-146 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca02g02448 Pkinase 1.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02448 - - ccaj:109806163 940.643