Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02447 atgaaccaaaCAGCAGATGAAGCAGCCACTTCTCCTATCGGTGCCAAGAAATACGGCACCAATGAAGCAAGCATATCTGGCTTTCAAACCCTTTATTGTTTGGTTCAGTGCACGCAGGACTTGTCACCCCAAGGTTGCAGAAGTTGTCTTAGTGATGCCATAGGGCTCCTTCCATGGTGCTGTGAAGGAAAACAAGGAGGGAGAATTCTAAATCCCAGCTGTAATGTTAGATACGAATTGTACCCTTTCTACCGCACAGACACCACTGCTTCCCctccaacgccaacgcccacaccatcaccctctcttcctccaactccaactccaacCAATTCTTCTAACTCCGCAGGGAGTAGTGGGATTTCATCGGGGACAATTGTTGCGATTGTGGTTCCGATTGCAATTGCTGTGCTGCTACTTGTTGGGGGCATTTGGATCTTAAGTAAAAGGGCAGCAAAGAAGCGTAACTCTGCACAAGACCCAAAAACTGGAACTGAGATCAGCACCGTGGAATCCTTGAGATTTGATTTCAGTACAATTGAAGCAGCCACAAATAAATTCTCTAATGCTAACAAGCTAGGTGAAGGCGGATTTGGTGAGGTTTACAAGGGCTTGCTTCCAAGTGGACAAGAAGTAGCTGTTAAGAGACTCTCTAAAAGTTCTGGACAAGGTGGGGACGAATTTAAGAATGAAGTAGAGGTGGTTGCAAAGCTTCAACACAGAAATTTGGTGAGGCTTCTAGGATTTTGTTTGGAAGGGGAAGAAAAGATACTTGTTTACGAATTTGTAGTCAACAAAAGCCTTGACTATATTCTTTTTGATCCTGATAAGCAAATATCATTGGATTGGACAAGTCGATACAAAATTATAAAAGGAATTGCTCGAGGCATTCATTATCTTCATGAAGATTCTAGACTTAAAATTATACATCGTGATCTTAAAGCTAGTAATGTATTGTTGGATGGAAATATGAATCCGAAAATCTCGGATTTTGGCATGGCAAGAATATTTGGAGTGGATCAAACTCAAGCAAATACCAACAGGATTGTAGGCACATATGGTTACATGTCTCCAGAATATGCAATGCACGGAGAATATTCGGCAAAGTCTGATGTATATAGTTTCGGAGTCCTCATTTTGGAGATTATAAGTGGCAAGAAGAACAGCTCTTTCTATGAAACCGACGTAGCTGAGGATCTATTGAGCTATGCTTGGAAATTTTGGAAGGATGAAGCGGCCATGGAGTTGATGGACCACTCATTAAGAGAATCATGTACTCCAAATGAAGTTATCAGATGTATCCATATCGGTTTACTCTGCGTCCAAGAAGATCCAGTAGATAGACCTACAATGGCATCAATAATTCTAATGCTTGATAGTTACTCTGTTACTATAGCGGTACCTAACAAGCCTGCATTGTTTATAAATAGTAGTACTGAACAAAACATGCCAATGTGGCTGCAAATTGATCAGTCTATTACCAAGTCAACAACAAAGTCTGTCAATGAGAAGCCGGTCCCGGTTAGTGAAGGAGATCCTCAATAA 1545 0.3942 MNQTADEAATSPIGAKKYGTNEASISGFQTLYCLVQCTQDLSPQGCRSCLSDAIGLLPWCCEGKQGGRILNPSCNVRYELYPFYRTDTTASPPTPTPTPSPSLPPTPTPTNSSNSAGSSGISSGTIVAIVVPIAIAVLLLVGGIWILSKRAAKKRNSAQDPKTGTEISTVESLRFDFSTIEAATNKFSNANKLGEGGFGEVYKGLLPSGQEVAVKRLSKSSGQGGDEFKNEVEVVAKLQHRNLVRLLGFCLEGEEKILVYEFVVNKSLDYILFDPDKQISLDWTSRYKIIKGIARGIHYLHEDSRLKIIHRDLKASNVLLDGNMNPKISDFGMARIFGVDQTQANTNRIVGTYGYMSPEYAMHGEYSAKSDVYSFGVLILEIISGKKNSSFYETDVAEDLLSYAWKFWKDEAAMELMDHSLRESCTPNEVIRCIHIGLLCVQEDPVDRPTMASIILMLDSYSVTIAVPNKPALFINSSTEQNMPMWLQIDQSITKSTTKSVNEKPVPVSEGDPQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02447 514 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 504 - -
Cca02g02447 514 Pfam Protein tyrosine and serine/threonine kinase 190 456 IPR001245 GO:0004672|GO:0006468
Cca02g02447 514 Pfam Salt stress response/antifungal 17 81 IPR002902 -
Cca02g02447 514 ProSiteProfiles Gnk2-homologous domain profile. 1 83 IPR002902 -
Cca02g02447 514 CDD STKc_IRAK 193 459 - -
Cca02g02447 514 Gene3D - 1 83 IPR038408 -
Cca02g02447 514 Gene3D Phosphorylase Kinase; domain 1 147 262 - -
Cca02g02447 514 ProSiteProfiles Protein kinase domain profile. 187 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02447 514 MobiDBLite consensus disorder prediction 87 117 - -
Cca02g02447 514 MobiDBLite consensus disorder prediction 92 108 - -
Cca02g02447 514 Gene3D Transferase(Phosphotransferase) domain 1 264 469 - -
Cca02g02447 514 SUPERFAMILY Protein kinase-like (PK-like) 172 484 IPR011009 -
Cca02g02447 514 SMART serkin_6 187 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02447 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Cca02g02447 514 ProSitePatterns Protein kinases ATP-binding region signature. 193 215 IPR017441 GO:0005524
Cca02g02447 514 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02447 Cca-Chr2 45554776 45557788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02447 6 512 Receptor kinase-like Gene Family AT4G05200 55.227 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca02g02447 PK_Tyr_Ser-Thr 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02447 - - gsj:114402115 812.372