Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02437 ATGGCTTCGTATCTCGAATATGTCATACCCTTGATCCTTTTAATCTCCCTCAATTTTACTGCCACAAAAGCACAGAGCCTCTCTTATCAGTACCAAGTTTGCTCAACAAACAAATTCACTCCAAACAGCACTTACCAAACCAACCTCAGAACCCTCTTCTCTTCTCTATCATCCGAAGCCTCCAACAGCGTCGAATTCTTCAACAACACCGTCGCAGGAACAAAGACAAACCCTTCCGACACAGTGTACGGACTCTTCATGTGCAGAGGCGACATCCCCTCCGACCTATGTAGCCAGTGTGTCGGAAACGGAACACAGAGGCTATCCACACACGAAGACTGTTCCACGGCCGTAGCAGCGGTGGTGTACTACGACCAGTGCATAGTTCGGTATTCGAACCGATCCTTCTTCTCCGTCGTAACCATGAGCGCCGGCTATGTCCTGCCGAGCCCCATCAACATGACCAACCAAGAAAGCTTCAAGCGTTTGGTGTACGATACCCTCAACAAGACTGCGGATGACGCAGCCGATGAACCCACCGGTGATAAGAAGTTCGCCACGAGGGAAACGAACATAGACGAGTATCAGAAGCTTTATTGTCTTGCCCAGTGCACGCCGGACCTGTCGCTGCGAGATTGCAGAAGCTGTTTGGAAAGTTTGATAAACTCGGATCTGCCACGGTGCTGTGCGGGAACGCAGGGAGCCAGAGTTTTATATCCCAACTGCGTTATCAGGTATGAAATTTACCCTTTCTATCGGTCCCTTACGTCGGCGCCGGCGCAACCTCCCACTGCAAAATCCGGAGAAAATAAAAAAGGTAGATCAAGAACAATTATCTTAGTTGTTGTCCCCATTGTTATTTTGGTGACTCTTTGTACCTTTTGCTACTATTTTCTAAGGAGAAGAGCAAGAAAGACACGGAAAAGTCTTCTTAGAGAAAATTTTGGTGAAGAAAGTTCCATTCTAGAAGGGTTGCAGTTTGATTTAGCTACAATCAAAGTAGCAACGAATAATTTTTCACATGAAAACAAGATTGGAAAAGGTGGATTTGGAGAAGTTTACAAGGGACTTCTTCCTGATGGACGACATATAGCTGTTAAAAGACTTTCAACAAGTTCTAGACAAGGTTCAGTCGAGTTTAAGAATGAGATCTTATTGATAGCCAAGTTACAACATAGAAATCTTGTGGAATTCTTGGGATTTTGCCTAGAAGAGGAAGAGAAGATTCTCATATATGAATATGTGCCAAATCGTAGCCTCGATTATTTTTTATTTGATACTCAACAACAAAAGTTAAGCTGGTACGAGCGTTATAAAATTATAGGAGGGACTGCTCTAGGAATTCTTTATTTACATGAATATTCTCGACTAAAAATTATACACCGTGACCTTAAACCCAGTAATATTTTATTAGATGAAAGTATGAACCCAAAAATATCAGATTTTGGCTTGGCTAGAATCATTGATATAGATCAAAATCGTGCAGAAACTGACCGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATTTTCTGAAAAGTCAGATGTATTTAGTTTTGGAATCATAATTCTCGAGATTATTACCGGTAAAAAAAATGCAAGTTCTTATGAACCACACTATGTTGAGGAGGGCCTCATGACTTATGTTTGGAGACATTGGAAGAATCAAACACCATTGAGTATATTGGACCCAAATATGAAAGAAAATTATTTTCAAACTGAAGTTATTCGGTGCATTGAAATTGGATTATTATGTGTGCAAGAAAATCCAAATATTAGACCTACAATGGCAGATGTTGTTTCATATCTTAATAATCACTCACTTAAATTATCATCTCTACAAGAACCGGCATTTTACTTGCATGGAATAGATAAAAAAGTGGTCATGCAAGAAGGATCAAGTTCCAACATATCTGGAAATAGTTCTACACCATTCTCTGTCAATGAAATGTCTATTAGTAAGTTTTATCCACGATAA 1998 0.4039 MASYLEYVIPLILLISLNFTATKAQSLSYQYQVCSTNKFTPNSTYQTNLRTLFSSLSSEASNSVEFFNNTVAGTKTNPSDTVYGLFMCRGDIPSDLCSQCVGNGTQRLSTHEDCSTAVAAVVYYDQCIVRYSNRSFFSVVTMSAGYVLPSPINMTNQESFKRLVYDTLNKTADDAADEPTGDKKFATRETNIDEYQKLYCLAQCTPDLSLRDCRSCLESLINSDLPRCCAGTQGARVLYPNCVIRYEIYPFYRSLTSAPAQPPTAKSGENKKGRSRTIILVVVPIVILVTLCTFCYYFLRRRARKTRKSLLRENFGEESSILEGLQFDLATIKVATNNFSHENKIGKGGFGEVYKGLLPDGRHIAVKRLSTSSRQGSVEFKNEILLIAKLQHRNLVEFLGFCLEEEEKILIYEYVPNRSLDYFLFDTQQQKLSWYERYKIIGGTALGILYLHEYSRLKIIHRDLKPSNILLDESMNPKISDFGLARIIDIDQNRAETDRIVGTYGYMSPEYAMLGQFSEKSDVFSFGIIILEIITGKKNASSYEPHYVEEGLMTYVWRHWKNQTPLSILDPNMKENYFQTEVIRCIEIGLLCVQENPNIRPTMADVVSYLNNHSLKLSSLQEPAFYLHGIDKKVVMQEGSSSNISGNSSTPFSVNEMSISKFYPR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02437 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Cca02g02437 665 SUPERFAMILY Protein kinase-like (PK-like) 323 645 IPR011009 -
Cca02g02437 665 ProSiteProfiles Protein kinase domain profile. 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02437 665 ProSiteProfiles Gnk2-homologous domain profile. 142 251 IPR002902 -
Cca02g02437 665 Pfam Protein kinase domain 340 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02437 665 CDD STKc_IRAK 345 612 - -
Cca02g02437 665 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Cca02g02437 665 Gene3D - 146 251 IPR038408 -
Cca02g02437 665 Gene3D - 26 136 IPR038408 -
Cca02g02437 665 SMART serkin_6 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02437 665 Pfam Salt stress response/antifungal 34 133 IPR002902 -
Cca02g02437 665 Pfam Salt stress response/antifungal 154 248 IPR002902 -
Cca02g02437 665 ProSiteProfiles Gnk2-homologous domain profile. 27 136 IPR002902 -
Cca02g02437 665 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 266 639 - -
Cca02g02437 665 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 258 - -
Cca02g02437 665 Gene3D Phosphorylase Kinase; domain 1 300 414 - -
Cca02g02437 665 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 266 639 - -
Cca02g02437 665 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 18 258 - -
Cca02g02437 665 Gene3D Transferase(Phosphotransferase) domain 1 415 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02437 Cca-Chr2 45492430 45497338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02437 1 665 Receptor kinase-like Gene Family AT4G05200 45.809 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca02g02437 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02437 - - vun:114191422 1037.33