Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02435 ATGGCTTCCTTCAAGCTTGTCTACTACCTCTTTACCCTTATCAGCTTTATCAATTTCGTAACCAATAAAGCACAGGACGACCTTGGTTTTATGGACTACTTTTGTTCTGAGAACCTAACCACACCAAACAGCCCGTTCCAGTCAAACGTGAGGAGCCTTCTCTCTGACTTATCCTCCCACGCCACCGCTAATAACAATCCATACTACAACACCACAGTCGCCACTACAAACCACTCCCACACAGCCTATGGAATGTTCTTCTGCTCGGGTGATGTCCCCCCTCGCCATTGTACCCAATGCGTCGCTAACGCAACCCAACAAATACTCTCACTCTCATATTCGCATCCAAATTGTTCCTTGTCCACAGATGCATATCTTAAGTACGATGACTGCATGATTCGCTTTTCCAACCGTTCTTTCTTCTCCACCGTTGACATAACTCAACTCGGAGGTTCTTCATGCAGCGGTTTTAATGAGGAAAACTTGACGAGTTTAGTTTCCAAAACGATGAAGGAAGCGGCAGATAAGGCAGCGATTTCTCCTATTGGTGTCAAGAAGTACGCCACAAAGCAAGCAAGGGTGTATGGAGTTAAGACCCTTTACTGTGAGGCTCAGTGCACGGCAGACCTGTCACCCCAAGATTGCAAAAAATGTCTAAATGTTGCTCAAGAGAACTGCCAAGGATACTTTTTACCACGCACTGGTTTGCTCAGCTGTAAGATGGGCTGCGATTGGTACCCATTCTATCGCCCCAGTACCGCTGCGGCACCAACACAACCCCTTCCGCTCACAAATCCTTCCAATACAGACTCACAACATTCTACTTATCTTTCCAAAAATTGTTCCACCATCATCATCACCGACCCCACTTTTCAATCGAGTCTCATAGCCCTCCTCTCTTACTTTTCTTCCAACTCCACTACTACCAAAAACGGTTTCTTCGAGACCAAAGTCCACACTCTCACTGGTTTCTTCATGTGCTTTGGGGACTTTTCCCCCACTCTCTGTCACCAATGTGTCCTAAATGCAACGCAAACAATATCCTCGCAGTGCCCCTCCTCCAAAGAGGCTATCATTTGGTACAATCACTGTTTGCTTCATTATTCCGATCGCCCATCTCTCTCCGCACTAGATAAAAGTCCTGCATATAAGCACTTGAATATCGTCAACTATACTTCAAACCCTAACCAGCTGCAAAGCTTCTTCACTTGGACTTTTGCCAAGACTTTATATCCACTGCAGTATGACACAGACGGCAGTAGCAGTACCATTAAGAATTATGCAAAAAAACAAGTAAAACTGAATGATCGCCAAACTCTCCATATTCTTGTTCAATGCACACCAGACCAGCATAATTCGGATTGCAGGAGCTGTATAGAAAACATTTTTAACAACGAAATTCCATGGTGTTGTATGGAGATTCCAGAGGGAAGAGTACTGTATCCAAAATGCTATATGATGTTCGGATTGTCCCCGTTTGATGGATATACTCCCCAAATTCAGGAGCTCAGGCCAGCTACAGGAAATAATACAGGTTGGGCACGAACAATAATCTTAATTGGTATTGGTGTCCTCATCGTTGCTTCGACGACACTCCTCTCCTTTTGGTGCTACTTGCGAAGGACAAAAACAAGAAAAAATAATTACAAGATACTTCTCAGAAAAAACTTTGGTGAAGAAAGTACTATCGTAGAGGGATTGCAATATGATTTGACTACAATTAAAGCAGCAACAAATAATTTTTCACACGAAAATAAGATTGGTAAAGGTGGATTTGGAGAAGTTTATAAGGGTATTCTTGATGATGGACAACATATAGCTGTAAAGAGGCTTTCAACTCATTCTAAACAAGGTTCAATTGAATTCGTGAATGAGGTTTTATTAATAGCCAAGCTACAACACAAAAATCTTGTGGCATTGATAGGTTTTTGCCTTGAAGAGCAAGAAAAAATTCTTATTTATGAATTCATGCCGAATGGGAGCCTTGATTACCTTTTATATGGTATTCAACAACAAAAGTTAAGTTGGTCTGAACGCTACAAAATTATAGAAGGAACTGCTTTAGGAATTCTTTACTTACATGAGTATTCACGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAATATTTTATTAGATAAAAATATGAACCCAAAAATATCAGATTTTGGCATGGCTAGAATTGTTGAAATTGATCAAGATCGTGGAAACACTAATAGAATTGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGCTTGGAGAATTTTCTGAGAAATCAGATGTTTTTAGTTTTGGTGTCATGATTCTTGAGATTATTACTGGAAAAAAGAATGTACAATTCTATGATTCACACACTCTAATGGAAGGCCTAATAGCTTATGTTTGGAGACAATGGAAGAATAAAGACCTATTAAGCATCTTGGACTCACACATAAAAGAAAGTTATTCACAAGAGGAAGTTTTTCAATGCATTCATATTGGTTTATTATGTGTTCAAGAAAATCCAAATATTAGACCTACAATGGCCACAATTATTTCATATCTTAATAATTACTCACTTGAATTGCCATTTCCACAAAAACCATCATTTTTCTTGTCCAATCATAGAATGGATCAAGATACAACTAGACAACAAGAATCAAGTTCCAACCAAACTACTAATGATTTCAAGCTATTTTCTATCAATGAAATGTCCATGAGTAACATTTATCCTCGTTAA 2730 0.3938 MASFKLVYYLFTLISFINFVTNKAQDDLGFMDYFCSENLTTPNSPFQSNVRSLLSDLSSHATANNNPYYNTTVATTNHSHTAYGMFFCSGDVPPRHCTQCVANATQQILSLSYSHPNCSLSTDAYLKYDDCMIRFSNRSFFSTVDITQLGGSSCSGFNEENLTSLVSKTMKEAADKAAISPIGVKKYATKQARVYGVKTLYCEAQCTADLSPQDCKKCLNVAQENCQGYFLPRTGLLSCKMGCDWYPFYRPSTAAAPTQPLPLTNPSNTDSQHSTYLSKNCSTIIITDPTFQSSLIALLSYFSSNSTTTKNGFFETKVHTLTGFFMCFGDFSPTLCHQCVLNATQTISSQCPSSKEAIIWYNHCLLHYSDRPSLSALDKSPAYKHLNIVNYTSNPNQLQSFFTWTFAKTLYPLQYDTDGSSSTIKNYAKKQVKLNDRQTLHILVQCTPDQHNSDCRSCIENIFNNEIPWCCMEIPEGRVLYPKCYMMFGLSPFDGYTPQIQELRPATGNNTGWARTIILIGIGVLIVASTTLLSFWCYLRRTKTRKNNYKILLRKNFGEESTIVEGLQYDLTTIKAATNNFSHENKIGKGGFGEVYKGILDDGQHIAVKRLSTHSKQGSIEFVNEVLLIAKLQHKNLVALIGFCLEEQEKILIYEFMPNGSLDYLLYGIQQQKLSWSERYKIIEGTALGILYLHEYSRLKVIHRDLKPSNILLDKNMNPKISDFGMARIVEIDQDRGNTNRIVGTYGYMSPEYAMLGEFSEKSDVFSFGVMILEIITGKKNVQFYDSHTLMEGLIAYVWRQWKNKDLLSILDSHIKESYSQEEVFQCIHIGLLCVQENPNIRPTMATIISYLNNYSLELPFPQKPSFFLSNHRMDQDTTRQQESSSNQTTNDFKLFSINEMSMSNIYPR 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02435 909 ProSiteProfiles Gnk2-homologous domain profile. 28 140 IPR002902 -
Cca02g02435 909 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
Cca02g02435 909 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 507 891 - -
Cca02g02435 909 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 259 - -
Cca02g02435 909 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 269 498 - -
Cca02g02435 909 Gene3D - 383 493 IPR038408 -
Cca02g02435 909 Gene3D - 273 372 IPR038408 -
Cca02g02435 909 Gene3D - 27 140 IPR038408 -
Cca02g02435 909 Gene3D - 152 245 IPR038408 -
Cca02g02435 909 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 507 891 - -
Cca02g02435 909 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 269 498 - -
Cca02g02435 909 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 259 - -
Cca02g02435 909 SMART serkin_6 581 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02435 909 ProSiteProfiles Gnk2-homologous domain profile. 384 493 IPR002902 -
Cca02g02435 909 ProSiteProfiles Gnk2-homologous domain profile. 273 373 IPR002902 -
Cca02g02435 909 Gene3D Phosphorylase Kinase; domain 1 542 656 - -
Cca02g02435 909 ProSiteProfiles Gnk2-homologous domain profile. 147 248 IPR002902 -
Cca02g02435 909 SUPERFAMILY Protein kinase-like (PK-like) 565 882 IPR011009 -
Cca02g02435 909 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Cca02g02435 909 Pfam Salt stress response/antifungal 159 227 IPR002902 -
Cca02g02435 909 Pfam Salt stress response/antifungal 35 137 IPR002902 -
Cca02g02435 909 Pfam Salt stress response/antifungal 402 488 IPR002902 -
Cca02g02435 909 Pfam Salt stress response/antifungal 288 370 IPR002902 -
Cca02g02435 909 ProSiteProfiles Protein kinase domain profile. 581 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02435 909 CDD STKc_IRAK 587 854 - -
Cca02g02435 909 Pfam Protein kinase domain 582 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02435 909 Gene3D Transferase(Phosphotransferase) domain 1 657 859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02435 Cca-Chr2 45469508 45473998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02435 267 909 Receptor kinase-like Gene Family AT4G05200 40.426 6.14e-160 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca02g02435 Pkinase 6.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02435 - - gmx:100792696 1145.95