Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02433 ATGGCTTCCTTCAAGCTTGTCTACTACCTCTTTACCCTTATCAGCTTTATCAATTTCGTAACCAATAAAGCACAGGACGACCTTGGTTTTATGGACTACTTTTGTTCTGAGAACCTAACCACACCAAACAGCCCGTTCCAGTCAAACGTGAGGAGCCTTCTCTCTGACTTATCCTCCCACGCCACCGCTAATAACAATCCATACTACAACACCACAGTCGCCACTACAAACCACTCCCACACAGCCTATGGAATGTTCTTCTGCTCGGGTGATGTCCCCCCTCGCCATTGTACCCAATGCGTCGCTAACGCAACCCAACAAATACTCTCACTCTCATATTCGCATCCAAATTGTTCCTTGTCCACAGATGCATATCTTAAGTACGATGACTGCATGATTCGCTTTTCCAACCGTTCTTTCTTCTCCACCGTTGACATAACTCAACTCGGAGGTTCTTCATGCAGCGGTTTTAATGAGGAAAACTTGACGAGTTTAGTTTCCAAAACGATGAAGGAAGCGGCAGATAAGGCAGCGATTTCTCCTATTGGTGTCAAGAAGTACGCCACAAAGCAAGCAAGGGTGTATGGATTTAAGACCCTTTACTGTGAGGCTCAGTGCACACCAGACCTGTCACCCCAAGATTGCAAAAAATGTCTAAATGTTGCTCAAGAGAACTGCCAAGGATACTTTTTACCACGCACTGGTTTGCTCAGCTGTAAGATGGGCTGCGATTGGTACCCATTCTATCGCCCCAGTACCGCTGCGGCACCAACACAACCCGTTCCGCTCACAAATCCTTCCAATACAGACTCACAACATTCTACTTATCTTTCCAAAAATTGTTCCACCATCATCATCACCGACCCCACTTTTCAATCGAGTCTCATAGCCCTCCTCTCTTACTTTTCTTCCAACTCCACTACTACCAAAAACGGTTTCTTCGAGACCAAAGTCCACACTCTCACTGGTTTCTTCATGTGCTTTGGGGACTTTTCCCCCACTCTCTGTCACCAATGTGTCCTAAATGCAACGCAAACAATATCCTCGCAGTGCCCCTCCTCCAAAGAGGCTATCATTTGGTACAATCACTGTTTGCTTCATTATTCCGATCGCCCATCTCTCTCCGCACTAGATAAAAGTCCTGCATATAAGCACTTGAATATCGTCAACTATACTTCAAACCCTAACCAGCTGCAAAGCTTCTTCACTTGGACTTTTGCCAAGACTTTATATCCACTGCAGTATGACACAGACGGCAGTAGCAGTACCATTAAGAATTATGCAAAAAAACAAGTAAAACTGAATGATCGCCAAACTCTCCATATTCTTGTTCAATGCACACCAGACCAGCATAATTCGGATTGCAGGAGCTGTATAGAAAACATTTTTAACAACGAAATTCCATGGTGTTGTATGGAGATTCCAGAGGGAAGAGTACTGTATCCAAAATGCTATATGATGTTCGGATTGTCCCCGTTTGATGGATATACTCCCCAAATTCAGGAGCTCAGGCCAGCTACAGGAAATAATACAGGTTGGGCACGAACAATAATCTTAATTGGTATTGGTGTCCTCATCGTTGCTTCGACGACACTCCTCTCCTTTTGGTGCTACTTGCGAAGGACAAAAACAAGAAAAAATAATTACAAGATACTTCTCAGAAAAAACTTTGGTCAAGAAAGTACCATTGTAGAGGGATTGCAATATGATTTGACTACAATTAAAGCAGCTACAAATAATTTTTCACACGAAAATAAGATTGGTAAAGGTGGATTTGGAGAAGTTTATAAGGTGAGAAACTGTGATAATTTTTCTTTTCCTTTCGATCATGTTTTCAATAATAATTATTTGTTTTTTCAGGGTATTCTAATTGATGGAAGACATATAGCTGTAAAGAGACTTTCAACTTGTTCTAAACAAGGTTCAATTGAATTTGTGAATGAGATTTTATTAATAGCCAAGCTACAACACAAAAATCTCGTGGCATTGATAGGTTTTTGTCTAGAAGAGCAAGAAAAAATTCTTATTTATGAATTCATGCCGAATGGAAGCCTTGATTATCTTTTATATGGTACTCAACAACAAAAGTTAAGTTGGTCTGAGCGCTATAAAATTATCAGAGGAACTGCTTTAGGAATTCTTTACTTACATGAATATTCACGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAATGTTCTATTAGATGAAAATATGAACCCAAAAATATCAGATTTTGGCATGGCTAGAATTGTTGAAATGGATCAAGATCGTGGAAATACTAATAGAATTGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGCTTGGAGAATTTTCTGAGAAATCAGATCTACCACCAAAAACGGTTTCTTCGAGACCAAAGTCCACACTCTCACTGTGCCCCTCCTCCAAAGAGGCTATCATTTGGTACAATCACTGTTTGCTTCATTATTCCGATCGCCCATCTCTCTCCGCACTAGATACAAGTCCTGCATATAAGCACTTGAATATCGTCAACTATACTTCCAATCCTAACCAGCTGCAAAGCTTCTTCACTTGGACTTTGGCGACTACTTTAAATGAATTGCAGTATGACACAGACGGCAATAGCAGTACCATTAAGAATTATGGGAAAAAACAAGTAAAACTGAATGATCACCAAACTCTCCATACTCTTGTTCAATGCACGCCAGACCAGCATAATTCGGATTGCACCCAGTGTCTAGTAAACATTGTCAACGAAATGCCATGGTGTTGTATGAAGATTCCAGAGGGAAGAGTACTGTATCCAAAATGCTATATGATGTTTGGATTGTCCCCGTTTGATGGATATGCTCCTCAAATTCAGCCGCTCAGGCCAGCTACAGGAAATCATACAGGTTGGGCACGAAAAATTATCTTAATTGGTATTGGTGTCCTCATCGTTGCTTCGACGACACTCCTCTCCTTTTGCTACTTTCCTCTGTCACCAATGTGTCCTAAACGCAACCCAAACAATATCCTTAAAGTGCTCCTCTTCCAAAGTGGCTATGTGTATAAGGACTTGAATATCGTCAATTATACTTCCAAGCCTAACCAGCTGCAAAGCTTCTTCATGGCGAGTATTTTGAGTGAAGAACTGAATGGTAACCAAACTCTCTATACTCTTGCTCTACGCCAGATCTACTAA 3180 0.4088 MASFKLVYYLFTLISFINFVTNKAQDDLGFMDYFCSENLTTPNSPFQSNVRSLLSDLSSHATANNNPYYNTTVATTNHSHTAYGMFFCSGDVPPRHCTQCVANATQQILSLSYSHPNCSLSTDAYLKYDDCMIRFSNRSFFSTVDITQLGGSSCSGFNEENLTSLVSKTMKEAADKAAISPIGVKKYATKQARVYGFKTLYCEAQCTPDLSPQDCKKCLNVAQENCQGYFLPRTGLLSCKMGCDWYPFYRPSTAAAPTQPVPLTNPSNTDSQHSTYLSKNCSTIIITDPTFQSSLIALLSYFSSNSTTTKNGFFETKVHTLTGFFMCFGDFSPTLCHQCVLNATQTISSQCPSSKEAIIWYNHCLLHYSDRPSLSALDKSPAYKHLNIVNYTSNPNQLQSFFTWTFAKTLYPLQYDTDGSSSTIKNYAKKQVKLNDRQTLHILVQCTPDQHNSDCRSCIENIFNNEIPWCCMEIPEGRVLYPKCYMMFGLSPFDGYTPQIQELRPATGNNTGWARTIILIGIGVLIVASTTLLSFWCYLRRTKTRKNNYKILLRKNFGQESTIVEGLQYDLTTIKAATNNFSHENKIGKGGFGEVYKVRNCDNFSFPFDHVFNNNYLFFQGILIDGRHIAVKRLSTCSKQGSIEFVNEILLIAKLQHKNLVALIGFCLEEQEKILIYEFMPNGSLDYLLYGTQQQKLSWSERYKIIRGTALGILYLHEYSRLKVIHRDLKPSNVLLDENMNPKISDFGMARIVEMDQDRGNTNRIVGTYGYMSPEYAMLGEFSEKSDLPPKTVSSRPKSTLSLCPSSKEAIIWYNHCLLHYSDRPSLSALDTSPAYKHLNIVNYTSNPNQLQSFFTWTLATTLNELQYDTDGNSSTIKNYGKKQVKLNDHQTLHTLVQCTPDQHNSDCTQCLVNIVNEMPWCCMKIPEGRVLYPKCYMMFGLSPFDGYAPQIQPLRPATGNHTGWARKIILIGIGVLIVASTTLLSFCYFPLSPMCPKRNPNNILKVLLFQSGYVYKDLNIVNYTSKPNQLQSFFMASILSEELNGNQTLYTLALRQIY 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02433 1059 ProSiteProfiles Gnk2-homologous domain profile. 28 140 IPR002902 -
Cca02g02433 1059 Gene3D - 152 245 IPR038408 -
Cca02g02433 1059 Gene3D - 835 945 IPR038408 -
Cca02g02433 1059 Gene3D - 273 372 IPR038408 -
Cca02g02433 1059 Gene3D - 383 493 IPR038408 -
Cca02g02433 1059 Gene3D - 27 140 IPR038408 -
Cca02g02433 1059 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 619 788 - -
Cca02g02433 1059 Gene3D Transferase(Phosphotransferase) domain 1 680 788 - -
Cca02g02433 1059 ProSiteProfiles Gnk2-homologous domain profile. 837 945 IPR002902 -
Cca02g02433 1059 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 259 - -
Cca02g02433 1059 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 269 493 - -
Cca02g02433 1059 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 810 950 - -
Cca02g02433 1059 ProSiteProfiles Gnk2-homologous domain profile. 147 248 IPR002902 -
Cca02g02433 1059 ProSiteProfiles Gnk2-homologous domain profile. 384 493 IPR002902 -
Cca02g02433 1059 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 507 597 - -
Cca02g02433 1059 ProSitePatterns Serine/Threonine protein kinases active-site signature. 724 736 IPR008271 GO:0004672|GO:0006468
Cca02g02433 1059 Gene3D Phosphorylase Kinase; domain 1 544 679 - -
Cca02g02433 1059 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 507 597 - -
Cca02g02433 1059 SMART serkin_6 581 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02433 1059 SUPERFAMILY Protein kinase-like (PK-like) 559 787 IPR011009 -
Cca02g02433 1059 ProSiteProfiles Gnk2-homologous domain profile. 273 373 IPR002902 -
Cca02g02433 1059 ProSiteProfiles Protein kinase domain profile. 581 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02433 1059 Pfam Salt stress response/antifungal 851 940 IPR002902 -
Cca02g02433 1059 Pfam Salt stress response/antifungal 159 227 IPR002902 -
Cca02g02433 1059 Pfam Salt stress response/antifungal 402 488 IPR002902 -
Cca02g02433 1059 Pfam Salt stress response/antifungal 35 137 IPR002902 -
Cca02g02433 1059 Pfam Salt stress response/antifungal 288 370 IPR002902 -
Cca02g02433 1059 Pfam Protein tyrosine and serine/threonine kinase 584 787 IPR001245 GO:0004672|GO:0006468
Cca02g02433 1059 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 810 950 - -
Cca02g02433 1059 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 16 259 - -
Cca02g02433 1059 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 269 493 - -
Cca02g02433 1059 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 619 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02433 Cca-Chr2 45385966 45438632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02433 800 945 Receptor kinase-like Gene Family AT4G05200 32.877 2.04e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca02g02433 PK_Tyr_Ser-Thr 1.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02433 - - ccaj:109812943 964.14