Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02415 ATGCAAGACTTTTTGGGCTCCCTTCGCCGTTCCTTGGTTTTCCGACACGGTGCTGCTGATGATGCACCTTTTTCCGGAATCGCGGACAAGCTCGGCTCCGTCATTCGCAAATCGCGAATCGCACCTAAACCTCTGCCTCCTCCGATACGGTGGCGCAAGGGCCAGTTGATAGGTTCCGGCGCCTTCGGTCGAGTTTACATGGGAATGAACCTCGACTCCGGGGAGCTTATTGCCATCAAACAGGTTTTAATCGCGTCTGGTAGCGCTTACAAGGAGAATACACAGGCTAATATTCGGGAGCTCGAAGAAGAAATCAAGCTTCTCAAGAATCTTACTCATCCAAATATTGTTAGATACTTGGGAACTGCTAGAGAGGAGGATTCCTTAAATATTCTGCTGGAGTTTGTACCTGGTGGATCTATCTCATCACTCTTGGGGAAATTTGGATCCTTCCCTGAATCGGTTATGAAAATGTATACAAAACAGCTTTTATTGGGCCTTGAATACCTTCACACTAACGGGATTATTCACAGGGATATTAAGGGTGCCAACATTTTAGTTGATAACAAAGGGTGCATTAAACTCGCAGACTTTGGGGCATCCAAAAAAGTTGTTGAACTGGCTACCATCAATGGTGCAAAGTCAATGAAGGGTACCCCACATTGGATGTCTCCTGAAGTTATTTTACAGACAGGACATACAATCTCCACTGATATATGGAGCGTTGCATGTACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCCCTGGAGGTTTCAGCTCTTTTCTATATTGGGTCAACTAAATCTCATCCACCCATACCTGAACATCTATCTGCCGAGGCAAAGGATTTTTTGCTGAAATGCTTCCATAAGGAACCAAATTTAAGACCTTCTGCATCAGAATTGTTACAGCATCCATTCATCACGTGCGACTATCATGGATCTCATTCAATATTACGTAGTTCTATCAGGGACTCTAGCCATAAGATGGCAACATATGGGATGAACTGTAGAAACTTTTTAGATTCTGTCCAGGGATCAACTTGCACAGGCTTAAAGGATGTTTGTCGAATAGATAGCATAAGGGTCTCAACGGTATATCATAAACCAGGTTCCTACCAGAGAGCAGACAACGATGACGATGACATGTGTCGAATGGATGATGATGATTTTTTGATTGATTCATCAGTAAAATCTGAATCTCTATTGGCTTCTGATGTTATGAAGAGTTGCAATCCTATGTGCAAACCAGTGGATGACCAGCCCTGCAATTTCGATGAAACTCAATATTTGGGGAAAAGCAGACCAAACTTGTCCCAAGATCAAACTATTAATAAAACTATCAGAACTTTCAAAGCATCTCTGAGGGTAGAAAATGAATTCTCATTTTCAAGTGAGCCTCCAGGAACTGAAGATGACGATGAAGTTACCGAGTCTAAAATTAGAGCCTTCCTAGATGCTAAGGCCCTTGAACTGAAGAAGCTCCAAACACCTCTTTATGAAGAATTCTTTAGCATATCAAATGCAACCATTGCTCCTGCTCCCATTGCAGTTGCACAGAGTAATGTTATTTCGGAATTCTCAAATGTAACATCAAGAGGCAGGTCTCCTGGTTTGGCTTGGAGACGATTCTCAATGGTTGGCAGTGTTAATCTTGCAAGCTCTGGGAGTCATAGCAAATATCGATCAAAGCTTAGTGGTGCTCACTGTCGACCTTTGCAGGAAATTCAGCCATCTGAGCCAAATGAATCAAAGGAGGCTCTTCATGATGATGGGCTGGAATCATTTAGTGTAAGCTCAAGATTCTCTGAGAGGCAAAGGAAATGGAAAGAAGAATTGGTTGAAGAGCTTGAGAGGAAGAGAGAGATGATGCGTAAGGCTGGAATTGGAGGGAAGATTACATCTCCAAAGGATCGCAAATTTTATGGTGATTGA 1953 0.4301 MQDFLGSLRRSLVFRHGAADDAPFSGIADKLGSVIRKSRIAPKPLPPPIRWRKGQLIGSGAFGRVYMGMNLDSGELIAIKQVLIASGSAYKENTQANIRELEEEIKLLKNLTHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVMKMYTKQLLLGLEYLHTNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPLEVSALFYIGSTKSHPPIPEHLSAEAKDFLLKCFHKEPNLRPSASELLQHPFITCDYHGSHSILRSSIRDSSHKMATYGMNCRNFLDSVQGSTCTGLKDVCRIDSIRVSTVYHKPGSYQRADNDDDDMCRMDDDDFLIDSSVKSESLLASDVMKSCNPMCKPVDDQPCNFDETQYLGKSRPNLSQDQTINKTIRTFKASLRVENEFSFSSEPPGTEDDDEVTESKIRAFLDAKALELKKLQTPLYEEFFSISNATIAPAPIAVAQSNVISEFSNVTSRGRSPGLAWRRFSMVGSVNLASSGSHSKYRSKLSGAHCRPLQEIQPSEPNESKEALHDDGLESFSVSSRFSERQRKWKEELVEELERKREMMRKAGIGGKITSPKDRKFYGD 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02415 650 Coils Coil 91 111 - -
Cca02g02415 650 Gene3D Transferase(Phosphotransferase) domain 1 50 343 - -
Cca02g02415 650 CDD STKc_MAPKKK 50 314 - -
Cca02g02415 650 SMART serkin_6 51 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02415 650 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 35 548 - -
Cca02g02415 650 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Cca02g02415 650 PANTHER MAP KINASE KINASE KINASE 35 548 - -
Cca02g02415 650 Coils Coil 613 633 - -
Cca02g02415 650 ProSiteProfiles Protein kinase domain profile. 51 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02415 650 SUPERFAMILY Protein kinase-like (PK-like) 50 315 IPR011009 -
Cca02g02415 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Cca02g02415 650 Pfam Protein kinase domain 52 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02415 Cca-Chr2 45209254 45220033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02415 1 638 MAP Kinase Kinase Kinase AT3G06030 54.723 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Cca02g02415 Pkinase 2.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02415 - K20606 ccaj:109794823 1206.05