Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02408 ATGGCTTCCGCCACCCCCAAAGAGATAGCCAGGGAGCTCCCTCCTCTGCTCCGCGTCTACACCGACGGAAGCGTGGAGCGCTTCCTAGGCTCTCCGTTCGTGCCACCCACCCTCGAAGACCCCGAAACATTAGTCTCATCGAAAGACGTGGTAATCTCCGAAAACCCGTCCATCTCGGCGCGCGTCTTCCTCCCCAAAGTCGACCACCAAAAgaagaagcttccgatcctggtgtacttccacggcggcgcgttctgcctggagtcggcgttctccttcctccaccaccgctacctgaacATCATAGCTTCGGAAGCCAAGGCTCTAGTGGTTTCGGTGGAGTACAGGGTGGCGCCAGAACACCCTCTTCCCGCGGCATACGAAGATAGCTGGGAAGCCCTCAAATGGGTAACCTCTCATTCCAGGAATGAGAGAAAAGATGGTGAAGCGTGGTTGATCGACCACGGTGAGTTTACCAGGTTTTACGTAGGGGGTGACACCTCGGGTGCCAACATTGCACATAATGTTTGTCTTCGTGTGGGTGGTGAGGCTTTAGGAGGTGTCAGAATAGCGGGCGCGGTTCTTGCTTTTCCCTTGTTTTGGGGTTCGGAACCGGTTTTGTCCGAACCGGTTGAGGGGCACGAAGAGAGTTCGCCCATGCGGGTTTGGAAGTTTGTGTACCCTGATGCGCCACGTGGCATTGATAACCCTTTGATCAATCCTTTGGCTCCTGGGGCTCCTAGCTTGGCCACCCTTGGGTCGCGTAAGTTGTTGATTTTTGTGGCGGGGAAGGATGATCTTAGGGAGAGAGGGGTTTGGTACTATGATGCTGTTAAGGAAAGTGGGTGGCAGGGGGATGTGGAACTCGTTCGTGTCGAGGGAGAGGAACATTGCTTTCAGATCTATCATCCTCAAACTCACAATTCAAAAGGCGTTATTAGTCGTATAGCTTCTTTCCTCGTTTGA 966 0.4855 MASATPKEIARELPPLLRVYTDGSVERFLGSPFVPPTLEDPETLVSSKDVVISENPSISARVFLPKVDHQKKKLPILVYFHGGAFCLESAFSFLHHRYLNIIASEAKALVVSVEYRVAPEHPLPAAYEDSWEALKWVTSHSRNERKDGEAWLIDHGEFTRFYVGGDTSGANIAHNVCLRVGGEALGGVRIAGAVLAFPLFWGSEPVLSEPVEGHEESSPMRVWKFVYPDAPRGIDNPLINPLAPGAPSLATLGSRKLLIFVAGKDDLRERGVWYYDAVKESGWQGDVELVRVEGEEHCFQIYHPQTHNSKGVISRIASFLV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02408 321 Gene3D alpha/beta hydrolase 16 321 IPR029058 -
Cca02g02408 321 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 5 320 - -
Cca02g02408 321 SUPERFAMILY alpha/beta-Hydrolases 7 320 IPR029058 -
Cca02g02408 321 PANTHER ARYLACETAMIDE DEACETYLASE 5 320 - -
Cca02g02408 321 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
Cca02g02408 321 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 77 93 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02408 Cca-Chr2 45114756 45116007 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02408 8 320 Carbohydrate Esterase AT1G19190 39.498 1.80e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02408 - K13258 gmx:100785409 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02408 02 45114756 45116007 Cca06g01999 06 35196960 35198314 PCT