Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02407 ATGTATGAATTTTTGGGGTTTGGCATTGCATGCAAAATTTGGGGGTTTAGAAAGAAAATCTTGGACCCAAACTTGGTGGCTGCTGAAGAAGGTGCTAAGGTTGTCAAGGTAATGCAAGATGGTAGTGGAGAATTTAAAACCATCACTGATGCCATTAAGAGCGTACTTGATGGGAACGCCAAGCATGTAATTTTTTACATCGGAGTTGGAAATTATAATGAAAAAAAACCAAAATTGAGAAGACAAAGCCTTGTATGGGGCACAACAGAATATGTCAAGCATAACCTTTGCAAGAACAGCTAA 303 0.3861 MYEFLGFGIACKIWGFRKKILDPNLVAAEEGAKVVKVMQDGSGEFKTITDAIKSVLDGNAKHVIFYIGVGNYNEKKPKLRRQSLVWGTTEYVKHNLCKNS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02407 100 Gene3D - 13 82 IPR012334 -
Cca02g02407 100 SUPERFAMILY Pectin lyase-like 32 75 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02407 Cca-Chr2 45111759 45112061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02407 17 75 Carbohydrate Esterase AT1G69940 54.237 2.45e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02407 K01051 - gmx:100813174 92.4337