Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02405 ATGGCGTCGAAGGAAATTGTAACAGAAATTCCTTCGTGGATCCGCGTGTTCAGCGATGGCAGCGTGGAGCGGCCACGCGATTTTCCGATTGTGGCAGCGACGCTCAAGGACCCGAACACAGGAATCTCATCCAAAGACATTAGGATCTCACGCAACCCTCCGCAAGCAATCTCCGTTGTGGTTTCGGTGGAATACAGGCTGGCCCCAGAGCACCCTCTCCCCGCAGCTTACGATGACTGCTGGCACGCTCTCCAATGGGATCGATAA 267 0.5543 MASKEIVTEIPSWIRVFSDGSVERPRDFPIVAATLKDPNTGISSKDIRISRNPPQAISVVVSVEYRLAPEHPLPAAYDDCWHALQWDR 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02405 88 Pfam alpha/beta hydrolase fold 58 86 IPR013094 GO:0016787
Cca02g02405 88 PANTHER ARYLACETAMIDE DEACETYLASE 54 86 - -
Cca02g02405 88 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 54 86 - -
Cca02g02405 88 Gene3D alpha/beta hydrolase 33 87 IPR029058 -
Cca02g02405 88 PANTHER ARYLACETAMIDE DEACETYLASE 3 54 - -
Cca02g02405 88 SUPERFAMILY alpha/beta-Hydrolases 59 86 IPR029058 -
Cca02g02405 88 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 3 54 - -
Cca02g02405 88 SUPERFAMILY alpha/beta-Hydrolases 5 86 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02405 Cca-Chr2 45095530 45095796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02405 6 86 Carbohydrate Esterase AT5G16080 31.250 1.03e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02405 - K13258 vun:114192512 123.25