Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02377 ATGCCGAGCCTGTTCTCCAAACACCTTCATCTGTGTTTCTTGAAGCCGAAATACCCCACCATTCTCTGCCAGCCACCACCTTCCACGGACACGAAGGACTCCGACAGCACAGAGCCAGACTTGGCCTCCGTGTTGGCCTCCCAGCGGTTCTTCTTCTCCTCCCCTGGCACCTCCAACTCCATCGTAGAGTCCCCCGACAGTCGCAGCTTCTTCATTCCCACAGGGGGTGGCGTGAGAGTCCCCAAATACTCTCTCAACCCCTACAAAGACTTCCTCCGCTCCATGCAGGACATGGTTCGTTCTCGCCAACTCTTGGACATCACGCTAGACTCCGATTACCTCCATGAACTTCTCCTATGCTACCTCGCTCTCAATCCCACACACACCCACAAATACATCCTTCGCGCTTTCACCGACCTCCTTCTCCAACTCTTCTCTTCCGCCCCTTCCCGCACTACGTACGAGGTTTGTGTTTCATCAAAAGGACAGCTTGAGCCAAACCAAGGAGGCGTCTGTAGACTGTAG 525 0.5467 MPSLFSKHLHLCFLKPKYPTILCQPPPSTDTKDSDSTEPDLASVLASQRFFFSSPGTSNSIVESPDSRSFFIPTGGGVRVPKYSLNPYKDFLRSMQDMVRSRQLLDITLDSDYLHELLLCYLALNPTHTHKYILRAFTDLLLQLFSSAPSRTTYEVCVSSKGQLEPNQGGVCRL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02377 174 Pfam Transcriptional repressor, ovate 84 145 IPR006458 -
Cca02g02377 174 PANTHER TRANSCRIPTION REPRESSOR OFP12 32 153 - -
Cca02g02377 174 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 80 146 IPR006458 -
Cca02g02377 174 ProSiteProfiles OVATE domain profile. 80 143 IPR006458 -
Cca02g02377 174 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 32 153 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02377 Cca-Chr2 44731150 44732078 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Cca02g02377 Ovate 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02377 - - gmx:102667886 246.128