Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02361 ATGTTCTCTTCCACATATGACTCCAACCTTTTCCCAACCTTTCCCTCGTCTTCTTACCCTTCCCTTCCTTTTCTCATTGATCCTGAAAATGATTTTGCAAGCAACACCTTTCTTGATGACCCTTTTCTTGTTCCCTTCGTTCCCACTACGCATGATCCTCCATTCCCTGAAGAAACTGTTGCCAATTTTGCAGTTGCAGACTGCACTGCCATGCTTGAACATGATGCAAACACTAACTATGGTTCCCACTATGGTAGCATTTCCAATTTTCTCACCCAGAAACCAGCCGTAGCCAAGAAAGACAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGGGACCGCAGGGTGAGATTATCAAGCGAAATAGCCCGCAAGTTCTTTGATCTTCAGGACATGTTAGAGTTTGACAAACCGAGTAACACCCTTGAGTGGCTCTTCACAAAGTCTGAGAATGCAATCAAAGAACTAGCTCAAAGTAAGAATAGCGGCAGTAGTAGTGGGGGTGACAAGTGCTCGTGCGACCCTTCTGTGGATTCAAATAACAACAAATCATTGGTGGCAAGTGGGGGTCATGGTTCTAAAGGGAGGAAGTTGAAATGGTCACAGAGGGATGATGTTTGTGTTCAAACAAAAAAGGAGTTaagggaaagggcaagagcaagagcaagagaaagGACTTGTTACAAGATGTGTAGCAGTAGAAGGGTGCAGCAAGAGTTTGATGAGAGGTGCCCTGCAACTGCAACCACTCAAATGCTGCACCAATTGAGGTCATCCATTCAGCCTGAACCTGATGATGCTTGCGCAAGATGGGTTCAACCTTATGACAACCCTTATGTCATCGATAGCGAAGCACCGAGAGATGGCTTTAACGTCATTGAAGAATCTATTATGATAAAAAGGAACATGAGGCCGTCATCTTTGATGGCTTCTCATCACCAAAACCAAAACCAAAACCTTGTGATCCCTAGGGATGCAAGTTTCAACAATAATGAGTACTGCGCGCCCCTATTACCCTATTCCACTCCAAACTGGGATACTAGTGGCCTTGTTAATGGATGCTCTAACTTTTGTGGAATAGGCTCCATGAATCTATCAACATGTTTCATGAACCCGTGA 1122 0.4314 MFSSTYDSNLFPTFPSSSYPSLPFLIDPENDFASNTFLDDPFLVPFVPTTHDPPFPEETVANFAVADCTAMLEHDANTNYGSHYGSISNFLTQKPAVAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELAQSKNSGSSSGGDKCSCDPSVDSNNNKSLVASGGHGSKGRKLKWSQRDDVCVQTKKELRERARARARERTCYKMCSSRRVQQEFDERCPATATTQMLHQLRSSIQPEPDDACARWVQPYDNPYVIDSEAPRDGFNVIEESIMIKRNMRPSSLMASHHQNQNQNLVIPRDASFNNNEYCAPLLPYSTPNWDTSGLVNGCSNFCGIGSMNLSTCFMNP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02361 373 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Cca02g02361 373 ProSiteProfiles R domain profile. 213 230 IPR017888 -
Cca02g02361 373 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 369 IPR005333 GO:0003700
Cca02g02361 373 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 17 369 - -
Cca02g02361 373 Pfam TCP family transcription factor 98 233 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02361 Cca-Chr2 44477308 44478931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02361 97 342 TCP Transcription Factor Family AT1G67260 34.686 1.39e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Cca02g02361 TCP 1.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02361 - - aprc:113871835 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02361 02 44477308 44478931 Cca08g00535 08 8708185 8710775 PCT