Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02358 ATGTTTTCAGAAGGTGGTGTTAAACCGAATATGGAATTGGAAGCAGGAGCTTTGAACTCAAAGACGATGAGTAACAAAAAACTTTGCAGCAAAAGTATCATGTTTAAAGTTGATAAAATTGATCTGAGCAATTTGGATGTGATGCTGGAAAAGCACTTGAACAAAATTTTCCCTAAGAGCGTTGTGGCAAGAAGGCCTTTAGAGTCATGGGAGATTGATTTGGCCAAATTGGATGTTCACTATTCTGTAGCTAATGGAGGCTATGGCACTGTCTACAGGGGTTCTTATGACAGTCAAGATGTTGCAGTCAAAGTCTTAGACTGGGGTGAGGATGGTGTTGCGACTGCTGCTGAAATTTCTGCTTTACGGGCATCATTTTGGCAGGAGGTTACTGTGTGGCATAAACTTGATCATCCAAATGTCACAAAATTTATTGGAGCTTCAATGGGAACTTCAAACCTTAAGATGCCCTTACCAGCCGTTGGTCGAAATCCTCCTTCGAAAGCATGTTGTGTTATTTCTGAGTTTCTTCCTGGTGGCACATTGAAGCACTACTTGTCTAAGAATAAGAAGAACAAACTTCCATACAAGGTTGTGATTCGGCTGGCTTTGGACCTCGCTAGAGGCCTTAGTTATCTACACTCAAGGAAAATTGTTCATCGCGATGTGAAAACTGATAATATGCTGCTAGATGCAAACCATAATTTGAAAATCGCTGATTTTGGAATTGCTCTTGATGCTACAAATGGAAGTGAGTTGACCGGTGAAAGTGGAACCTATGGATATATGGCACCAGAGGTTTTGAATGGCAAGCCTTACAACAGAAAGTGTGATGTCTATAGTTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTAAAACGCCTTATTCAAAGCTAAGCCTTGTTACAGTGTCATGTATATCTTTTAATCAGCATTTACGACCAGAGATTCCAAAATGTTGTCCAAGTGGTTTAGCAAACATCATGAGAAAATGCTGGGATTCAAAACCAGAGAGGCGTCCAGAAATGCATGAGGTGGTGAAAATGTTGGAAGCAATAGATACAAGCAAGGGAGGTGGAATGATACCAACTCTCAGAAACCATCATGTTTTTTGTTTGTTTCCCACTCGTCGTCCCTAG 1140 0.407 MFSEGGVKPNMELEAGALNSKTMSNKKLCSKSIMFKVDKIDLSNLDVMLEKHLNKIFPKSVVARRPLESWEIDLAKLDVHYSVANGGYGTVYRGSYDSQDVAVKVLDWGEDGVATAAEISALRASFWQEVTVWHKLDHPNVTKFIGASMGTSNLKMPLPAVGRNPPSKACCVISEFLPGGTLKHYLSKNKKNKLPYKVVIRLALDLARGLSYLHSRKIVHRDVKTDNMLLDANHNLKIADFGIALDATNGSELTGESGTYGYMAPEVLNGKPYNRKCDVYSFGICLWEIYCCKTPYSKLSLVTVSCISFNQHLRPEIPKCCPSGLANIMRKCWDSKPERRPEMHEVVKMLEAIDTSKGGGMIPTLRNHHVFCLFPTRRP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02358 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Cca02g02358 379 SMART serkin_6 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02358 379 Pfam Protein tyrosine and serine/threonine kinase 81 350 IPR001245 GO:0004672|GO:0006468
Cca02g02358 379 Gene3D Phosphorylase Kinase; domain 1 66 157 - -
Cca02g02358 379 PANTHER KINASE-LIKE PROTEIN 14 366 - -
Cca02g02358 379 CDD STKc_MAP3K-like 86 350 - -
Cca02g02358 379 PRINTS Tyrosine kinase catalytic domain signature 174 187 IPR001245 GO:0004672|GO:0006468
Cca02g02358 379 PRINTS Tyrosine kinase catalytic domain signature 277 299 IPR001245 GO:0004672|GO:0006468
Cca02g02358 379 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672|GO:0006468
Cca02g02358 379 PRINTS Tyrosine kinase catalytic domain signature 321 343 IPR001245 GO:0004672|GO:0006468
Cca02g02358 379 Gene3D Transferase(Phosphotransferase) domain 1 179 360 - -
Cca02g02358 379 ProSiteProfiles Protein kinase domain profile. 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02358 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 366 - -
Cca02g02358 379 SUPERFAMILY Protein kinase-like (PK-like) 57 350 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02358 Cca-Chr2 44414924 44416747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02358 31 379 MAP Kinase Kinase Kinase AT3G22750 63.636 4.49e-174 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Cca02g02358 PK_Tyr_Ser-Thr 5.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02358 - - gmx:100807899 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02358 02 44414924 44416747 Cca06g01966 06 34847931 34851075 PCT