Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02355 ATGATGGAGGGAGCTTCTACTTGTTCCACAACAAGTGCCAGAGAAGAGGGTGTTGATTTGACCAAAATCTCTCTCCGACCCATTAGTCTTGATGATCTTGATGATCTCATGTTGTGGACCACTGATGAAAAGGTGGCCAGGTATTGCACTTGGGAACCTTACACTAGCAAAGAGGATGGCATTAACTTCATCCAAAATATTGCAAGCAAATCTCTATGGTTCAGGGCAATTTGTCTCAATGATCGTGCAATTGGGTGTATTGATTTGTGCTTATGTTCGGGCAAGGGTAGAAATAGGGGCAAATCAGCTGAAATTGGGTACGCTTTAGGGTGGAGATACTGGGGTAAAGGGATTGTAACACATGTAGTGAAACAAGTGGTTAAAGGTGCATTCAGGGAGTTTCCAGACTTGGAGAGGCTACAAGGTCTAGTTGATGTGGAAAATGTGGGTTCTCAGAGGGTGCTGGAGAAGGCTGGTTTTCAAAGGGAGGGAGTTCTCAGGAAGTACGTCATCATTAAAGGAAAGAGTAGAGATATGGTAATGTTCAGTGTTCTTTCCAACGATCCTCTACAACCATGTCAACTCTAG 588 0.4388 MMEGASTCSTTSAREEGVDLTKISLRPISLDDLDDLMLWTTDEKVARYCTWEPYTSKEDGINFIQNIASKSLWFRAICLNDRAIGCIDLCLCSGKGRNRGKSAEIGYALGWRYWGKGIVTHVVKQVVKGAFREFPDLERLQGLVDVENVGSQRVLEKAGFQREGVLRKYVIIKGKSRDMVMFSVLSNDPLQPCQL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02355 195 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 178 IPR000182 GO:0016407
Cca02g02355 195 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 14 190 - -
Cca02g02355 195 Gene3D - 10 188 - -
Cca02g02355 195 Pfam Acetyltransferase (GNAT) domain 23 161 IPR000182 GO:0016407
Cca02g02355 195 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 14 190 - -
Cca02g02355 195 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 23 185 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02355 Cca-Chr2 44366687 44367438 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca02g02355 Acetyltransf_3 1.5e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02355 - - gmx:111043201 317.005