Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02352 ATGGGGAAGACAGGGAAATGGCTTAGAAACTTGTTGACAGGTAAGAAGGACAAGGAAAAGGAGAAGGAAAAATCTACAACCAACCTGAATTCTTCTTCAAATGGAACAGAAAATTCAACCACTCCAATTTCCACAACCCCAAAGGAGAAGAAGCGATGGAGTTTTAGAAGATCATcagcctcagccgctgctacagccacagccacaccaacaACAGTTTCCAAGGAATTGAATTTTGTAGAATCAAATGTCACTGCTTCACAAACAGCGCAAACTGACATTGATATTCAGAATGAGCAGAAGAAGCATGCCATGGCTgctgtagctgctgTGATCCGTTTGACTTCTGCTTCCAATGGAACATCAAAAAGCATTGAAGAAGCTGCTGCCATTAAAATCCAATCTGCCTTTCGCTCTCACCTGGCAAGAAAAGCATTGTGTGCTCTTAGAGGATTAGTGAAGTTGCAGGCACTAGTAAGGGGTCACTTGGTGAGAAAACAGGCCAAGGCAACATTGAGATGCATGCAGGCTTTGGTGACAGCACAAGCCAGAGCTCGTGCTCAAAGGGTCCGAACAGGGTCAGAAGGAAAGCCTAATCAAAAGCAACCAATGCACAGAAATGCCGCAGAGGATGATTTGTTCAGGCGCATGTATAATGAAATGGACAGAAACTTGGAAGATAACATCAAGATTGTAGAGATGGATGTTTGTGAACCAAAAGGTAACTCCAGAAGCAGAAGCAGCGGTGTGTATCATCATGGACATCACAAGCAGTCTGACCATAGATATTCCACACATTATTCAACAAATGGTTCATATTCAAAGGAAGAAAACTACAAGGTATCACCAGCTCCATCAGCATTGACAGAGTTGAGTCCAAGAGCCTGCAGTGGCCATTTTGAGGACTGTTTCAGCACAGCACAAAGCAGTCCACAGTTCTACTCTGCTGTGTCAAGAACAGACGATTCAAAGCACCCTTTTGCTTTCCCTAGGCCAGCTTATGCAGAATCCATGTCCTATGACTACCCTTTGTTCCCAAATTACATGGCTAACACTGAATCATCAAGAGCCAAAGTCAGATCACATAGTGCACCAAAACAAAGACCAGATTCATTTGAGAGGCAACCAAGCCGGCGAAGAGTTTCGGTTGAGGGAAGAAACGTCCCAAGGCCAATGAGGATGCAAAGGTCATCTTCACATGTGGGTGCCACTGCCCATAACTACCAATATCCTTGGTCGATCAAACTTGATAGATCCGCAGTTTCACTCAAAGACAGCGAGTGTGGCTCTACAAGTACAGTGCTCACTAACACTAATTATTGCAGGTCTCTTGTTGCATATGACCCACGTGGAGATAGGTACTGA 1365 0.4234 MGKTGKWLRNLLTGKKDKEKEKEKSTTNLNSSSNGTENSTTPISTTPKEKKRWSFRRSSASAAATATATPTTVSKELNFVESNVTASQTAQTDIDIQNEQKKHAMAAVAAVIRLTSASNGTSKSIEEAAAIKIQSAFRSHLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRVRTGSEGKPNQKQPMHRNAAEDDLFRRMYNEMDRNLEDNIKIVEMDVCEPKGNSRSRSSGVYHHGHHKQSDHRYSTHYSTNGSYSKEENYKVSPAPSALTELSPRACSGHFEDCFSTAQSSPQFYSAVSRTDDSKHPFAFPRPAYAESMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRVSVEGRNVPRPMRMQRSSSHVGATAHNYQYPWSIKLDRSAVSLKDSECGSTSTVLTNTNYCRSLVAYDPRGDRY 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02352 454 MobiDBLite consensus disorder prediction 359 386 - -
Cca02g02352 454 MobiDBLite consensus disorder prediction 242 278 - -
Cca02g02352 454 MobiDBLite consensus disorder prediction 356 401 - -
Cca02g02352 454 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515
Cca02g02352 454 Pfam IQ calmodulin-binding motif 153 169 IPR000048 GO:0005515
Cca02g02352 454 Gene3D - 125 177 - -
Cca02g02352 454 SMART iq_5 125 147 IPR000048 GO:0005515
Cca02g02352 454 SMART iq_5 148 169 IPR000048 GO:0005515
Cca02g02352 454 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Cca02g02352 454 PANTHER IQ-DOMAIN 5-RELATED 1 431 - -
Cca02g02352 454 MobiDBLite consensus disorder prediction 27 48 - -
Cca02g02352 454 Pfam Protein of unknown function (DUF4005) 326 386 IPR025064 -
Cca02g02352 454 MobiDBLite consensus disorder prediction 10 26 - -
Cca02g02352 454 MobiDBLite consensus disorder prediction 1 68 - -
Cca02g02352 454 MobiDBLite consensus disorder prediction 264 278 - -
Cca02g02352 454 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 431 - -
Cca02g02352 454 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02352 Cca-Chr2 44349430 44351819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02352 1 442 IQD Protein Family AT4G14750 46.320 9.08e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02352 - - gmx:100817667 735.717