Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02347 ATGAACGGCGGCGGCACCGCCACCTTCCGATCCATCCTCGACAAGCCTCTCAACCAGCTCACCGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCCTGGAACAAATCGCAGGCGATCCAACAGGTCATTTGCCTCAAAGCTCTTCTCGAACCTTCCGACGATGACGCTCCTCCCGCCATGCACCAGGCCAATTTCACTCAACCTATTCCTAAGGCCCCGCCTCCTGAACCACCCGCTTTTCATGCCGCCGACGACTTTCACAACTCTCCCTCTTCTGGGGAAAAACCTACGGAAACCAATGATACCAACCTTGCTAGCCCCAGAGGGTGTGCAACTAGTGGATCATTTGGACAAATGACAATTTTCTATTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCTCGAGCAATCATGCAGCTTGCAGCAAATCCTGTCCAGGTTACTCAAGATGATCCAATAAATGGAAATGCAGCAGTTTGGACTTCTCCTTGCCACATGACCATGGATGTCCCTGTTGATACAACAATACTTCAGGTTGCTCAAGCAGATAAGATGTTGGAATATCCTCTGCCATACAGAGAGAAAGGGAGCATAGTTCGTGATGCTGATGTAGAGGGTCAGGCAAGCAGAAAAATGTCATTGCAGCGATATCTTGAAAAGCGTAAGGACAGGGGAAGATTGAAAGGCAAGAAATTGACGGGGATAACTTCATCTAACTTCGAGATGTATTTGAACCTTCCAGTGAAGGTCCATGCGTCAAATGGGAATTCAAGCCGTAGTAGTACTAGCTCTCCACCACAGCCTCGACTGCCTCTAGTTTCCAGTGGTTCAGCTGACAACCAGATAAAAGTTGCACTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 951 0.4816 MNGGGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVICLKALLEPSDDDAPPAMHQANFTQPIPKAPPPEPPAFHAADDFHNSPSSGEKPTETNDTNLASPRGCATSGSFGQMTIFYCGKVNVYDGVSPDKARAIMQLAANPVQVTQDDPINGNAAVWTSPCHMTMDVPVDTTILQVAQADKMLEYPLPYREKGSIVRDADVEGQASRKMSLQRYLEKRKDRGRLKGKKLTGITSSNFEMYLNLPVKVHASNGNSSRSSTSSPPQPRLPLVSSGSADNQIKVALPIDLNDKDVQEC 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02347 316 MobiDBLite consensus disorder prediction 67 123 - -
Cca02g02347 316 Pfam tify domain 132 160 IPR010399 -
Cca02g02347 316 ProSiteProfiles Tify domain profile. 126 161 IPR010399 -
Cca02g02347 316 SMART tify_2 126 161 IPR010399 -
Cca02g02347 316 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 6 301 - -
Cca02g02347 316 MobiDBLite consensus disorder prediction 269 296 - -
Cca02g02347 316 MobiDBLite consensus disorder prediction 104 123 - -
Cca02g02347 316 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 301 IPR040390 -
Cca02g02347 316 Pfam Jas motif 225 242 IPR018467 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02347 5 271 Tify Gene Family AT4G14720 46.488 1.29e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Cca02g02347 tify 3.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02347 - - gmx:100813937 493.426