Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02324 ATGAGGTTCACAGATTTTGTCTTTGCAGCAGTAATAGCTGTTATCTTCGTTGCTATTATTATCAAAATCCATGGCTATAGATTTTTTGACAAGAAAAGAAAATACCACCCTGTTGCAGGCACGGTTATACACCAACTTTTTAACTTTCATAGGCTCCTCGAGTACATGGTCGACCTCACAATCCAGAGGAAAACATACAGGTTGCTTAGCTTCATCAGAAGTGAGGTCTACACTGCAAACCCTGCTAATATTCAGCATATCCTGGCGACAAACTTTCCAAACTACGGCAAGGGTTGGTATCACTATAGTGTTATGTCAGATTTTCTAGGAGATAGTATATTCACAGTGGATGGAGAGAAGTGGCGACATCATAGAAAGACATCAAGCTATCAATTCTCAACCAAAATGTTGAGAGACTTCAGCAGTTCAGCGTTCAAATCCAATGCAGTAAAACTTGCAGGAGTAGTGTCTGATGCTGCAATCTCAAACAATGTTATTGAGATGCAGGATTTGTTCATGAAATCAACTCTGGATTCTGTATGTAAGGTTATCCTTGGTGTAGAACTGGACACTATGTGTGGAACCTATAAAGAAGGCACAGAGTTCTCCAATGCTTTTGATGAAGTAAGTGCTGCTATCATGTATCGCTATTTTAACTTTCTCTGGAAGATCATGCGGTTCTTGAACATCGGATCGGAAGCAGTACTTAGGAACGGTTTAAGAGTGATTGATGAATTCGTGTATAATCTAATCAGGAAAAAGATTGAGGAGATCCAAAAGCTACAAGATAATTCTACTGTGATGAAAGGAGACATTTTGTCAAGGTTTATAGAATTGAAAGAAACTGATCCAAAGTACCTTAGAGATATTTCCTTGAGTTTTATCCTTGCAGGGAAAGACACAACAGCAATTACTCTTTCCTGGTTCCTTTACCAACTCTGCAAGCATCCTCGCGTGCAAGAGAAGATTGCACAAGAAATTAGAGAGGCAACAAATGTAGCAGCTGGATCAACAATTGACGAACTTGCAGCTAGTGTAACTGAAGAGAACATGGAAAAGATGCAGTACCTACATGCAGCATTGAATGAAACACTAAGGCTCCACCCAGCAGTTCCAGTGGAAGGTAAGTTTTGTTTTGCAGATGACACGTGGCCAGATGGATTTAGTGTTAGGAAAGGTGATCTTATTTCATTCCAACCATATGTGATGGGAAGAATGAAATTCTTGTGGGGTGATGATGCTGAGAAATTCAGGCCAGAGAGATGGCTTGATGAAAATGGAATTTTGAAGAAAGAAAGCCCTTATAAGTTCACAGCCTTCCAGGGGGGTCCAAGAATTTGCCTGGGTAAGGAGTTTGCATACAGACAAATGAAGATATATTCTACAGTTCTCTTAGGTAGCCACAGCTTTAAACTGGCGGATCAAAATGGATCAGTAAAATACAAAACCATGCTTACTCTACAAATTGATGGTGGCATGCACGTATATGCTTCTCAGAGACAGAATTAA 1509 0.3989 MRFTDFVFAAVIAVIFVAIIIKIHGYRFFDKKRKYHPVAGTVIHQLFNFHRLLEYMVDLTIQRKTYRLLSFIRSEVYTANPANIQHILATNFPNYGKGWYHYSVMSDFLGDSIFTVDGEKWRHHRKTSSYQFSTKMLRDFSSSAFKSNAVKLAGVVSDAAISNNVIEMQDLFMKSTLDSVCKVILGVELDTMCGTYKEGTEFSNAFDEVSAAIMYRYFNFLWKIMRFLNIGSEAVLRNGLRVIDEFVYNLIRKKIEEIQKLQDNSTVMKGDILSRFIELKETDPKYLRDISLSFILAGKDTTAITLSWFLYQLCKHPRVQEKIAQEIREATNVAAGSTIDELAASVTEENMEKMQYLHAALNETLRLHPAVPVEGKFCFADDTWPDGFSVRKGDLISFQPYVMGRMKFLWGDDAEKFRPERWLDENGILKKESPYKFTAFQGGPRICLGKEFAYRQMKIYSTVLLGSHSFKLADQNGSVKYKTMLTLQIDGGMHVYASQRQN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02324 502 PANTHER - 11 501 - -
Cca02g02324 502 Gene3D Cytochrome P450 30 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PANTHER CYTOCHROME P450 11 501 - -
Cca02g02324 502 SUPERFAMILY Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 Pfam Cytochrome P450 66 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02324 502 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02324 Cca-Chr2 43992137 43994834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02324 10 502 Cytochrome P450 AT2G45510 50.397 5.24e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02324 - - pvu:PHAVU_007G063800g 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02324 02 43992137 43994834 Cca02g02324 02 43992137 43994834 ECH