Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02323 ATGTTCATGATTCCAACCACTCCAATGGAGAAGATGAGTCTCATTCTAACAAGCTTTTTCCTCTTGACCACACTCTTATCTGCAAATGCTGGATTTGTCAAGAAGACTTACATCATTCAAATGGATAAGTCAGCAAAGCCTGACTCCTTCTCCGATCACCTTGAATGGTATTCATCAAAAGTGAAATCAATTCTGTCCAAATCAGTAGAAGCTGAGATGGACAAAGAAGAGAGAATCATCTACACTTACCAAACTGCTTTTCATGGAGTGGCTGCCATGTTGAGTCAAGAAGAAGCTGAGAAGCTAGAGGCAGAAGAAGGTGTTGTGGCCATATTCCCTGATACAAAGTACCAACTACACACCACAAGAAGTCCAGCTTTTCTTGGGCTTGAACCAAGAAAAACCACTAACATGTGGTCAGAAAAGCTAGCTAACCATGATGTCATAGTGGGAGTACTAGACACTGGGGTTTGGCCAGAGAGTGAGAGCTTCAATGATACAGGCATGAGGCCAGTACCTTCTCACTGGAAAGGTGCCTGTGAGACTGGGAGAGGCTTCAGGAAACATCACTGCAACAAGAAGATTGTTGGGGCAAGAATGTTCTACCATGGATATGAGGCAGCAACCGGTAAAATTGATGAGCAAGTAGAATATAAGTCACCAAGGGATCAAGATGGTCATGGCACTCACACTGCAGCTACAGTTGCTGGCTCTCCAGTGCATGGTGCTAATCTTCTAGGCTATGCTTATGGCACAGCAAGAGGAATGGCACCAGGAGCAAGAATTGCAGCTTACAAAGTGTGCTGGACTAGTGGATGCTTCAGCTCAGATATTCTGTCAGCAGTTGATAGAGCTGTGGATGATGGAGTTGATGTTCTTTCCATCTCTTTGGGTGGTGGAGTCTCTTCTTACTACCGTGATAGTTTGTCTGTTTCTGCTTTTGGAGCAATGGAGAAAGGTGTTTTTGTTTCATGTTCTGCTGGAAATGCAGGACCTGACCCTGTGAGCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGAGATTTTCCTGCAGATGTTAGGCTTGGAAATGGAAGGAAGATAACTGGAACCTCACTCTACAAAGGGAGAAGCGTGCTCTCACTTAAGAAACAATACCCTTTAGTATACATGGGAAGTAACAACACAGGCATCCCTGATCCAAGATCTTTGTGCTTGGAAGGTACTTTGGATAGTAAATTGGTTTCAGGTAAGATTGTTATCTGTGACAGAGGCATTAGTCCAAGAGTGCAGAAGGGTCAAGTGGTGAAAAATGCAGGAGGGGTGGGAATGATTCTCACAAACACTGCAGCCAATGGAGAGGAGCTGGTTGCTGACTGTCACCTCCTTCCAGCAGTTGCAATTGGAGAAAAAGAAGTGGCAGCATTTTCATCAAGGGGGCCTAATTTTCTGACCCTTGAGATTCTGAAGCCTGATGTGGTGGCTCCTGGGGTGAACATTCTTGCTGCTTGGAGTGGTGCCATTGGTCCATCAAGTTTGCCAACAGATCACAGGAGGGTGGAGTTCAACATACTCTCGGGAACTTCAATGTCATGCCCTCATGTGAGTGGCATTGCTGCTTTGCTCAAGGCTAGGCATCCAGAATGGAGTCCTGCTGCTATAAAATCTGCTTTGATGACAACAGCTTATGTTCATGACAATACCATCAAGCCTCTCAAAGATGCTTCAAATGCTGAAGCTTCAACTCCTTATGATCATGGTGCTGGACACATCAACCCCGGAAGAGCTCTTGACCCAGGTTTGGTCTATGACATTGAGCCACAGGATTACTTTGAATTCCTGTGCACACAGAAGCTGACTCCATCTGAACTTGGAGTTTTTGCCAAATACTCAAACAGAACTTGCAAGCACTCTCTAGGAAGTCCAGGGGACCTCAACTACCCTGCCATATCTGTAGTTTTTCCACACAAAAATTCCACTTCAGTTTTGACCGTTCATAGAACTGCAACCAATGTTGGCCTTCCTGTTTCCAAGTACCATGTCGTGGTTTCATCTTTTAAAGGCGCTTCTGTTAAAGTTGAGCCAGAGACCTTGAGTTTTACTAGAAAATATCAGAAACTATCTTACAAAGTTACCTTCACAACAGAGTCTCAGCAAACAGAACCTGAATTTGGAGGTCTGGTATGGAAGGATGGTGTGCACAAGTTTGAAGAATTCATCATAAGAGAAGATCGTGCTAGTCATATACAGCATCTGTACTGA 2262 0.4461 MFMIPTTPMEKMSLILTSFFLLTTLLSANAGFVKKTYIIQMDKSAKPDSFSDHLEWYSSKVKSILSKSVEAEMDKEERIIYTYQTAFHGVAAMLSQEEAEKLEAEEGVVAIFPDTKYQLHTTRSPAFLGLEPRKTTNMWSEKLANHDVIVGVLDTGVWPESESFNDTGMRPVPSHWKGACETGRGFRKHHCNKKIVGARMFYHGYEAATGKIDEQVEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARIAAYKVCWTSGCFSSDILSAVDRAVDDGVDVLSISLGGGVSSYYRDSLSVSAFGAMEKGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPADVRLGNGRKITGTSLYKGRSVLSLKKQYPLVYMGSNNTGIPDPRSLCLEGTLDSKLVSGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAVAIGEKEVAAFSSRGPNFLTLEILKPDVVAPGVNILAAWSGAIGPSSLPTDHRRVEFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTIKPLKDASNAEASTPYDHGAGHINPGRALDPGLVYDIEPQDYFEFLCTQKLTPSELGVFAKYSNRTCKHSLGSPGDLNYPAISVVFPHKNSTSVLTVHRTATNVGLPVSKYHVVVSSFKGASVKVEPETLSFTRKYQKLSYKVTFTTESQQTEPEFGGLVWKDGVHKFEEFIIREDRASHIQHLY 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02323 753 SUPERFAMILY Subtilisin-like 119 601 IPR036852 GO:0004252|GO:0006508
Cca02g02323 753 Gene3D - 353 471 - -
Cca02g02323 753 PANTHER XYLEM SERINE PROTEINASE 1 473 734 - -
Cca02g02323 753 PANTHER XYLEM SERINE PROTEINASE 1 26 472 - -
Cca02g02323 753 SUPERFAMILY Protease propeptides/inhibitors 35 118 - -
Cca02g02323 753 Gene3D Peptidase S8/S53 domain 147 352 IPR036852 GO:0004252|GO:0006508
Cca02g02323 753 Gene3D Peptidase S8/S53 domain 472 610 IPR036852 GO:0004252|GO:0006508
Cca02g02323 753 Pfam Fibronectin type-III domain 644 736 IPR041469 -
Cca02g02323 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Cca02g02323 753 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Cca02g02323 753 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Cca02g02323 753 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Cca02g02323 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 473 734 IPR045051 -
Cca02g02323 753 Pfam Subtilase family 147 568 IPR000209 GO:0006508|GO:0008236
Cca02g02323 753 Gene3D - 614 742 - -
Cca02g02323 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 120 IPR037045 -
Cca02g02323 753 ProSiteProfiles Serine proteases, subtilase domain profile. 116 597 - -
Cca02g02323 753 Pfam Peptidase inhibitor I9 36 120 IPR010259 -
Cca02g02323 753 CDD Peptidases_S8_3 117 563 IPR034197 -
Cca02g02323 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 472 IPR045051 -
Cca02g02323 753 CDD PA_subtilisin_like 359 475 - -
Cca02g02323 753 Pfam PA domain 385 475 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02323 Cca-Chr2 43978870 43981611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02323 3 741 Subtilisin-like Serine Gene Family AT5G51750 66.279 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02323 - - gmx:100804847 1342.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02323 02 43978870 43981611 Cca08g00545 08 8845995 8848796 ECH
Cca02g02323 02 43978870 43981611 Cca02g02323 02 43978870 43981611 ECH
Cca08g00545 08 8845995 8848796 Cca02g02323 02 43978870 43981611 PCT