Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02316 ATGTCACGCTATGCTTTCCCACGTTCCGAACATTTTGGTGTAACAATAATTGCATTTTCCTTTTACCTTTTTCTCTCTGTTGTAAACTCATCGGTGGTGGACACTTACAAGCAAATCCACGTCACCCTTGCTCGCCAAGAAAAAACCTCACAAAGCCCTACTATCTTTAAAGACATCACCATCAACCAATCAAAATCCACATCGGCCCGGGTCTACGTGTCCCGCGAAGCACTGGATAATCCCCGGCTGAAGCTTCCCGTCGTATTTTTTTACCACGGTGGTGGATTCGTTGCCTTCAGCCCCTCCTCACCTGACGACCACAAGTTCTGCCTCCAAATGGCGAGCGACACGCAATCCGTCGTCGTTTCAATAGACTACCGCCTCGCCCCGGTGCACCGGCTACCGGCGGCGTACGAGGATGCCATGGAAGCATTGCACTGGATCACAACCACCAGCGAGGCCTTCGTGACGTCGCACGTTGACTATTCCCGATGTTTCCTCATGGGATGGAGCGCTGGGGGAAATATTGCCTACAACGCGGGTCTACGTGCGGCTGCGGAGGTGGATCAAATAAAACCGGTGGTGATCCAAGGGCTAATATTGATTCACCCGTTTTTTGGTGGAGTGAAGAGGACCCCTTCGGAGTTGAGGCTGGCCCACAATTTGGAATTGCCTCTGTTCGCCACTGATCTTGCGTGGAAGCTGTCACTGCCCATTGGCGCTAACCGTGATCACGAGTTTTCCAATCCAACGGTTCACGGTGGATCACCGGCTTTGGAGCAGATTAGAGGGCTTGGATGGAGGGTTGTGGTGTTCGGGTGCGATGGGGACCTTCTGGTGGACCGTCAAGTGGGGTTCACCAAATTGGTGGAGGAGAAAGGTGTGCATGTGGTGGGCCAGTTCTTCCGTGGAGGCTATCATGGGATTTTTATCCAAGATCCTTCCATGGCCAAAAAGGTCTACCACCAACTACAGATCTCAATGACCGCTTCTTAA 996 0.5221 MSRYAFPRSEHFGVTIIAFSFYLFLSVVNSSVVDTYKQIHVTLARQEKTSQSPTIFKDITINQSKSTSARVYVSREALDNPRLKLPVVFFYHGGGFVAFSPSSPDDHKFCLQMASDTQSVVVSIDYRLAPVHRLPAAYEDAMEALHWITTTSEAFVTSHVDYSRCFLMGWSAGGNIAYNAGLRAAAEVDQIKPVVIQGLILIHPFFGGVKRTPSELRLAHNLELPLFATDLAWKLSLPIGANRDHEFSNPTVHGGSPALEQIRGLGWRVVVFGCDGDLLVDRQVGFTKLVEEKGVHVVGQFFRGGYHGIFIQDPSMAKKVYHQLQISMTAS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02316 331 SUPERFAMILY alpha/beta-Hydrolases 25 314 IPR029058 -
Cca02g02316 331 Pfam alpha/beta hydrolase fold 88 310 IPR013094 GO:0016787
Cca02g02316 331 PANTHER CARBOXYLESTERASE 120-RELATED 38 321 - -
Cca02g02316 331 Gene3D alpha/beta hydrolase 22 328 IPR029058 -
Cca02g02316 331 PANTHER ARYLACETAMIDE DEACETYLASE 38 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02316 Cca-Chr2 43889398 43890691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02316 52 319 Carbohydrate Esterase AT5G16080 35.587 1.83e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02316 - - gmx:100777262 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00554 08 9090216 9126741 Cca02g02316 02 43889398 43890691 PCT
Cca02g02316 02 43889398 43890691 Cca08g00552 08 9035283 9037670 PCT