Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02315 ATGTCGTCGCTACACATAGTGGTTAGTGTATTCTCCTTATATCTCATCTATGTTGCTAACTCAACTATGGATCCCTACAAAGCTCTGAACATCATCCTGAACCCAGATGGCACCCTGACACGCTTAAGCATTCCTCCGCAAAGCCCTCCCTCACCGGATCCCACCCTCCCGACACCCGCTCTCTCCAAAGACCTCAGCGTCAACCAATCCAAGCACACATGGGCTCGGATCTACCTACCCCACAACACCAAATCCAAACTACCGCTCATTGTGTTCTACCACGGTGGGGGCTTTATCCTCTACAACGCCAACTCCACTTACTTCCATGATTTCTGCGCCAACATGGCCAACCAAACCCAATCCATCGTCGTTTCGCTCGAATACCGCCTTGCCCCGGAGCACCGTCTCCCCGCGGCCTACCAAGACTCCCTCGAAGTGCTGCACTGGATCAAAACCTCCGACGACCCGTGGTTGCGCCACGCGGATTACTCGCGATGTTATCTCATGGGGGAGAGCGCCGGGGGTAATATCGCCTACAACGCGGCTCTACGTGCAGCTGCCGAAGTTGATCACATCAAGCCGATCCAGATAAAAGGGGTGGTGTTAATTCAACCCTTTTTTGGTGGGACCCAGAGGACCCCATCGGAGGGTGGTGGTCATGCTAGGATTTTGGATGAGATTAGGGCACTTGGCTGGAGGGTTGCGGTGTTTGGGTGCCAAGGGGACCCACTGGTGGACCGTGATAGCGACCTGGTCAAACTGCTCCATGCCAAGGGTATTCACGTGGTTGGCAAATTTTATCAAGGGGGTCGACATGGCATTTTCATCGAGTACTAG 837 0.5388 MSSLHIVVSVFSLYLIYVANSTMDPYKALNIILNPDGTLTRLSIPPQSPPSPDPTLPTPALSKDLSVNQSKHTWARIYLPHNTKSKLPLIVFYHGGGFILYNANSTYFHDFCANMANQTQSIVVSLEYRLAPEHRLPAAYQDSLEVLHWIKTSDDPWLRHADYSRCYLMGESAGGNIAYNAALRAAAEVDHIKPIQIKGVVLIQPFFGGTQRTPSEGGGHARILDEIRALGWRVAVFGCQGDPLVDRDSDLVKLLHAKGIHVVGKFYQGGRHGIFIEY 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02315 278 Pfam alpha/beta hydrolase fold 90 213 IPR013094 GO:0016787
Cca02g02315 278 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 25 216 - -
Cca02g02315 278 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 218 277 - -
Cca02g02315 278 Gene3D alpha/beta hydrolase 26 278 IPR029058 -
Cca02g02315 278 SUPERFAMILY alpha/beta-Hydrolases 32 275 IPR029058 -
Cca02g02315 278 MobiDBLite consensus disorder prediction 42 62 - -
Cca02g02315 278 PANTHER ARYLACETAMIDE DEACETYLASE 25 216 - -
Cca02g02315 278 PANTHER ARYLACETAMIDE DEACETYLASE 218 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02315 Cca-Chr2 43884931 43886388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02315 36 276 Carbohydrate Esterase AT5G16080 33.099 1.14e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02315 - - gmx:100777262 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02315 02 43884931 43886388 Cca02g02315 02 43884931 43886388 ECH
Cca08g00555 08 9140557 9148751 Cca02g02315 02 43884931 43886388 PCT
Cca02g02315 02 43884931 43886388 Cca08g00554 08 9090216 9126741 PCT