Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02305 ATGGGCAAGGAGTGGAATTGGGGTGGAAGGTCCTCCAAGAGAGGTGCACAAGCTGAAACACAAATCTCTTCTGGTTGCATGTGTGCACTCTTTCAGGCCTTTGATTTTCATCCATTTCACTTTTCCATAAACCACCAACAACCCTCTCGCACCTCACAAGACCACACTCTCCCCAAAGTTTTGTATTCTTCAGGAGTTGAAGCACAAAGGAATAGCTTGGAATCAGAAGATGGTACGCTGTCATCAATCTCAAAAGAAGAAAACTTTAAAATACCTaagaacattcgaatcaaaacaagtgcgagcacaagatcaagaacaggaaGCTTTAGTGATCTTTCATCAGAAATCAGTGCTTCTCCGGGGACCAAGACACCAACTTTGGTTGCAAGACTAATGGGTCTTGATCTTCTTCCGGATGCACATTCCTCTTCTTCCCCAACCCTTTCCACTCCAAACCAACAAGGTCATAGGCCACGCCAACACATCAAAATAATCAAACACAGAAACAGCACAGGCAGTGACAACTTGCCTGAGACTCCTAGAATGTCCTCTGCCAGAAGATCAGATGTTGAGCATCGACTCTCTCTCCAAATCAACAAGGAGAACACACTCCCTTGGGAGGATTTTGAGGCTCCTCGGTTCTCATTTTCAAAGAGGAAATACTATGATGAGAACAATAGCAGGAGTCCAAGCCACTACGCCAGGCAAATTGTGAAACAGGTTAAGGAAAGTGTGAGCAGGAAGGTTGGACTTGACATCACCAACACTGTCAAGAACAGAGAACAAGGAAGAGAAGAATTTGTTGGCCAATTCAAACTGAAGAAACACCCCAAAACATCAGTGAATGAATCCAGCCCTGGAAAACACTCAAACACATCTTACTCCCCAAGGCTAAGCAGATTTATTGATGCCAAACACAAGCCAAGCACCACCGTTACACAATCATCACCAATTACTCCAAAAAATCAAAACACACACACAGTGGTGAAACCACCATCACCTCCACCTGTGGTCAACATTGAAACGCAGCTTTCAAGAGTTTCTACAAAACCAAAGCCTCAAGCATTGGCCGAGAACCAAAAATCAGTCACAAAATGCAAGAAAAGTACCCCCGGAAAAATGAGTTCCCGAGTGAACAAACCACCACAGACATCAATCAGAAACAAGCAAGAAGAGTCATTTATTATTCGTCCCACATCAGCCACTAAAGCCAATGACATCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAACCAATCTTCTTGATAACCTCAATACGGTCCCAAATCTTCTCCCTGTCAAAACAGGCTCTTCTCCTCAAAAACAGTTACAGGTAGGTGATGCAATTGCAAAGCGCAGCACACAGTTATTTAGTTGTTCGCGCCCCACGTACAAGCAGGAAGCGCCACAAACACACCGAACCCGAGGAGGAGCCACCATCGATGACGACAAATCTCACGGCACCTTCGCCGCCACCACCACCGCCGCACACGACCAAGGAGCAGAATATCATTACATCACAACCATTCTCACACGTACTACTGGGGCCCAGGCGACGCTACCCCACCTCCAATTTCAATGGTTCTCTCCCACCCACCCTTTGGACCCTTCAGTTTTTCACCGTCTTGAGCACTACCCAACACCCAATTCCTTTGTTTCCTTCCCCGGCGACAACAAAGATTGCGTCTTTGCGCAGAAACAGCCTCTGGGTCCACGCTGCAACCGCAGATTGCTCTTCGATTTGGTCGACGAGTTGCTGTCGGAGATTCTGGCTCGGCCCAAGCGTTACAGAGGGACGCTGTCGGAGAGCGTGTGGGAGAGGGTTCGGAGGTTCCCACGTGCGAAGTGCGAGGTTTTGGAGGACATTGACGCGCTGATAGAGATGGAGGAGATGAGGGAGGAAGAGGAAGGGGAGGGGTTGGTGGCGGAGATTGAAAGGAACATAGCGGAGACGCTGCTACATGAAACGTTTACCGTTATGGTCGCTACGTAG 1998 0.465 MGKEWNWGGRSSKRGAQAETQISSGCMCALFQAFDFHPFHFSINHQQPSRTSQDHTLPKVLYSSGVEAQRNSLESEDGTLSSISKEENFKIPKNIRIKTSASTRSRTGSFSDLSSEISASPGTKTPTLVARLMGLDLLPDAHSSSSPTLSTPNQQGHRPRQHIKIIKHRNSTGSDNLPETPRMSSARRSDVEHRLSLQINKENTLPWEDFEAPRFSFSKRKYYDENNSRSPSHYARQIVKQVKESVSRKVGLDITNTVKNREQGREEFVGQFKLKKHPKTSVNESSPGKHSNTSYSPRLSRFIDAKHKPSTTVTQSSPITPKNQNTHTVVKPPSPPPVVNIETQLSRVSTKPKPQALAENQKSVTKCKKSTPGKMSSRVNKPPQTSIRNKQEESFIIRPTSATKANDIKTKSKRTHPLSTNLLDNLNTVPNLLPVKTGSSPQKQLQVGDAIAKRSTQLFSCSRPTYKQEAPQTHRTRGGATIDDDKSHGTFAATTTAAHDQGAEYHYITTILTRTTGAQATLPHLQFQWFSPTHPLDPSVFHRLEHYPTPNSFVSFPGDNKDCVFAQKQPLGPRCNRRLLFDLVDELLSEILARPKRYRGTLSESVWERVRRFPRAKCEVLEDIDALIEMEEMREEEEGEGLVAEIERNIAETLLHETFTVMVAT 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02305 665 MobiDBLite consensus disorder prediction 307 329 - -
Cca02g02305 665 PANTHER DUF4378 DOMAIN PROTEIN 1 664 - -
Cca02g02305 665 MobiDBLite consensus disorder prediction 139 190 - -
Cca02g02305 665 MobiDBLite consensus disorder prediction 463 487 - -
Cca02g02305 665 MobiDBLite consensus disorder prediction 141 158 - -
Cca02g02305 665 MobiDBLite consensus disorder prediction 340 389 - -
Cca02g02305 665 Pfam Domain of unknown function (DUF4378) 504 657 IPR025486 -
Cca02g02305 665 Pfam DUF761-associated sequence motif 114 144 IPR032795 -
Cca02g02305 665 MobiDBLite consensus disorder prediction 284 299 - -
Cca02g02305 665 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 664 - -
Cca02g02305 665 MobiDBLite consensus disorder prediction 272 389 - -
Cca02g02305 665 MobiDBLite consensus disorder prediction 100 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02305 Cca-Chr2 43729486 43732944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02305 95 665 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 36.160 2.49e-61 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02305 - - gmx:102659931 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02305 02 43729486 43732944 Cca02g02305 02 43729486 43732944 ECH
Cca08g00563 08 9391319 9395301 Cca02g02305 02 43729486 43732944 PCT