Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02285 ATGGGCTTTCTCCGACGACTCTTCGGTGGCGCCAAAAAACCCTCCGCTAAGAGAAAATGGCCCTTCTTCAAACACACCGTCAACAGCAAGTCACTCCCAGCCCCTCCCTCCACCCACTTTCATTCTTCCTCTCCCTTGGACGCTAACAAGCATGCCATcgccgtcgccgccgctaccgccgccgtcgccgaagccgctctcgccgccgcacacgccgctgccgAGGTTGTCAGACTCACTAGTGGCGCCTCCGCCGCCGCCGGTGTTAGCCAGCTGCGGTGCTCGGAGGTGACCGCCGCCGTTAAGATACAATCTGCGTTCCGTGGTTATTTGGCAAGGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAATTACAAGCATTGGTTAGGGGCCACATAGTGAGAAAGCAAAGTGCAGATATGCTGAGGCGCATGCAAACATTGGTGCGACTTCAGGCCCAGGCACGTGCAAGTCGTGCGCACTTGTCAGATACTACTCCTTCTTTCAACTCCTCCCTTTCTAACTACCCTGTCCCTGAAGAATATGAGCACCCACCTCGTGCCTTCAGTACAAAATTTGATGGATCATCTATACTTAAGAGATGTAGTTCCAATGCCAATTTTAGGAACCATGACTCAGAACGAGCCCGGTTTGACTCAAATTGGTTAAACCGTTGGATGGAACTAGATAACATGTGCAACCAAAGTGGAGAGTATGCTTCATTGAGAAATGGTCGCCATGATGATGATAAAAGTGACAAGATTCTTGAAGTAGATACTTGGAGGCCTCACTTCAAGTCCCACCATAGTAGTAGCGCCTCCTTTCAGACAGCACATTATTATTTGAGTTCTGAATATAATAATGACAACTTTGAGTCTCCATCAAAACGTTCATCAAAGGCTCTAAATCAAAGTCTAAACTCTTTGAAGTTTCACAAAGGAAAAGAAGAAGCAACTTCAAGAACTGCTGACAATAGTCCACAAGCATTTTCTGCCACCTCTAGAAATGGAAGCGGTGCAAGGAGAGGACCCTTTACCCCTACCAGGAGTGAGTGTTCGTGGGATTACTTCAGTGGCTTCTCGGGTCACCCCAATTACATGGCTAACACTGAATCTTTTCGAGCCAAGGTGAGATCACAAAGTGCACCAAGACAAAGGGTGGAGTTTGACAGATACGGTTCCATTAGGAGGCATGCTCAGGGTCTTTGTGATGTGGAGCATGATTCAGATTTAAGGAACAAAGTCTTACCTGCCTCAAACAGTGTGAACAAAATTGGGAGCACCAATTTAAGGTGA 1296 0.4437 MGFLRRLFGGAKKPSAKRKWPFFKHTVNSKSLPAPPSTHFHSSSPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGASAAAGVSQLRCSEVTAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQAQARASRAHLSDTTPSFNSSLSNYPVPEEYEHPPRAFSTKFDGSSILKRCSSNANFRNHDSERARFDSNWLNRWMELDNMCNQSGEYASLRNGRHDDDKSDKILEVDTWRPHFKSHHSSSASFQTAHYYLSSEYNNDNFESPSKRSSKALNQSLNSLKFHKGKEEATSRTADNSPQAFSATSRNGSGARRGPFTPTRSECSWDYFSGFSGHPNYMANTESFRAKVRSQSAPRQRVEFDRYGSIRRHAQGLCDVEHDSDLRNKVLPASNSVNKIGSTNLR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02285 431 PANTHER IQ-DOMAIN 5-RELATED 1 429 - -
Cca02g02285 431 Pfam Protein of unknown function (DUF4005) 326 388 IPR025064 -
Cca02g02285 431 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Cca02g02285 431 MobiDBLite consensus disorder prediction 159 177 - -
Cca02g02285 431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 141 IPR027417 -
Cca02g02285 431 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Cca02g02285 431 SMART iq_5 118 139 IPR000048 GO:0005515
Cca02g02285 431 SMART iq_5 95 117 IPR000048 GO:0005515
Cca02g02285 431 Gene3D - 96 148 - -
Cca02g02285 431 MobiDBLite consensus disorder prediction 321 343 - -
Cca02g02285 431 MobiDBLite consensus disorder prediction 159 181 - -
Cca02g02285 431 MobiDBLite consensus disorder prediction 313 347 - -
Cca02g02285 431 Pfam IQ calmodulin-binding motif 99 117 IPR000048 GO:0005515
Cca02g02285 431 Pfam IQ calmodulin-binding motif 120 137 IPR000048 GO:0005515
Cca02g02285 431 PANTHER CALMODULIN-BINDING PROTEIN 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02285 Cca-Chr2 43395992 43400872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02285 1 401 IQD Protein Family AT5G62070 46.963 5.28e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02285 - - gmx:100783694 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02285 02 43395992 43400872 Cca02g02285 02 43395992 43400872 ECH
Cca08g00611 08 10833650 10835125 Cca02g02285 02 43395992 43400872 PCT