Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g02281 | ATGGCTCTACCTGTTAACCTCGTACTCTCGTACTTCCTCGTCCTCCACACACTCTCTGCCATTGCAGACCAAACCTCCGACAACCTTTCCCTCCTTTCATTCAAACAGGCTCTCCAAAACCCTCACGTCCTCACCGTCTGGCACCCCGCCACCCCGCACTGCCACTGGCTCGGCGTCACCTGCCAACTCGGCCGAGTCACCTCGCTCTCTCTTCCCTCTCGCAACCTCAGAGGAACActctctccctcactcttctctctttcctcgctctctctcctcAACCTCCGCGACAACCACCTCTCCGGCGAGATCCCCGCCGAGCTCGGGGGGTTGCTTCAGCTCCACACTCTCCGACTCGGCTCCAACTCGCTCGCCGGAAAAATCCCGCCGGTGGTTGGTCACCTCACGAGCCTCCAAACTCTCGACCTCTCCGGGAACTCGCTCGCCGGAGAAGTGCCGGAGAGCGTCGGGAACTTGACCCGGCTTGAGTTTCTCGACCTGAGCAACAATCTTTTATCCGGTGCTCTTCCGGTGAGTCTGTTCGTCGGAGCAAAGTCTTTGATTTCCATTGATATCTCGAACAACTCGTTTTCCGGCGCGCTGCCGCCGGAAATCGGGAATTGGCGGAACCTCAGTGCCCTTTACGTGGGGATTAACAAGCTGTCTGGGACATTGCCGAGGGAAATTGGGTTGCTTTCAAAACTTGAAATTTTGTACTCCCCTTCCTGTTCCATCGAGGGTCCTTTGCCTGAGGAAATGGCGAAGCTGAAATCGTTGACCAAGCTTGACCTTTCTTACAACCCCTTGAGGTGTTCGATTCCGAGGTTCATCGGGGAGTTGGAGAGTTTGGAAATTTTGGACCTTGTGTTTTCCCAGCTTAATGGGTCAGTGCCAGCTGAGCTTGGGAATTGTAAGAATCTGAGGTCTGTCATGCTTTCTTTCAATTCACTTTCTGGGTCACTGCCTGAGGAACTTTCTGAGCTTCCTATGTTAACCTTTTCTGCTGAGAAGAATCAGCTTCACGGGCCTTTGCCTTCTTGGCTAGGAAAGTGGGCCAATGTTGATTCTCTCTTGCTTTCTGCTAACCGTTTATCTGGGGTGATTCCTCCTGAGCTTGGGAACTGTTCTGTGATGGAGCACCTCAGTTTGAGCAGCAATTTGCTGACAGGTCCCATTCCTTGGGAGCTTTGTAATGCTGCCTCACTTTTGGAGGTTGATCTTGATGACAACTTCCTCTCTGGTACTATCGACAATGTTTTTGTTAAGTGTAAGAACCTTACTCAGTTGGTTTTGATGAATAATCAAATTGTTGGTTCTATACCTGAGTACCTTTCTGAGCTTCCCTTGATGGTGCTGGACCTTGATTCTAACAATTTTAGTGGGAAAATACCTTCTGGTCTGTGGAATTCTTCAACTCTGATGGAATTCTCTGCTGCTAATAACCGTTTGGAGGGTTCTCTTCCTATGGAGATTGGGAATGCGGTTATGCTGGAGAGACTTGTTCTTAGCAATAATCGCCTGACAGGTGCTATTCCTAAGGAAATTGGAAGTCTCTTAAGCCTTTCAGTTCTTAATTTGAATGGGAATATGCTTGAAGGGAATATTCCAACTGAGCTTGGTGATTGCACTTCCCTTACTACGCTGGACCTTGGAAACAATCAGCTGAATGGGTCTATTCCTGAGAAACTGGTGGAACTGAGCCAGCTGCAGTGCCTAGTTCTTTCTCACAATAATCTGTCTGGGGCTGTTCCTGCCAAGAAATCGTCGTATTTTCGACAACTTAGCATCCCTGACTTGAGCTTTGTTCAGCACCTTGGTGTGTTTGATCTTTCATATAATAGATTGTCTGGCCCCATACCTGATGAACTTGGGAACTGTGTAGTGGTTGTGGATCTCTTAGTCAGCAACAACATGCTTTCTGGGAGCATTCCCAAATCACTCTCACGCTTGACGAATCTTACAACTTTGGATTTATCTGGCAACTTGTTGTCGGGTTCCATTCCACCAGAGCTTGGAGGTGCCCTCAAACTCCAGGGTTTGTATCTGGGACAGAATCAGCTATCAGGTGCCATCCCTGAAAGCTTCGGCAAGTTGAGTAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGCTTTCTGGACCAATTCCGGTTAGTTTTGGGAACATGAAGGGGTTGACTCACTTGGACTTGAGCTGTAATGAGCTCAGTGGCGAGCTTCCATCCTCTCTTTCAGGAGTGCAAAGCCTTGTTGGGCTTTACGTGCAGAATAATAAGCTTTCTGGCCAAGTGGGGGACCTCTTCTCAAACCCCATGACATGGAGGATTGAGACAGTGAATTTAAGTGTTAATTTCTTCAATGGGAACTTGCCGCCATCTTTGGGAAATCTTTCTTACTTGACAAATTTGGATCTTCATCGAAATATGTTGACAGGAGAGATTCCTTTAGACCTCGGGGATCTAATGCAACTGGAGTATTTTGATGTTTCAGGTTGGAAGGGCCCATACCAAAAAATGGCTAGTGGCATTGGCAGATCAGCATTGGATAATGCATGGAGGCTAGCTGGAATTGCCGTTGCACTCACATTACTAACTCTAAGCATTGCTTTTGTTCTACATAGATGGATTACCAAGAGGCAAAGTGATCCTGAGGAGTTTGAGGAGCGCAAACTGAACAGTTATGTGGATCACAATCTTTATTTCTTAAGCAGCAGCAGATCAAAGGAACCTCTGAGTATCAATGTTGCAATGTTTGAGCAGCCTCTCCTGAAATTAACTTTGGTGAACATCCTTGAAGCTACTGACAACTTCAGCAAGGCAAACATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTTTACCTAATGGAAAAACAGTGGCTGTGAAGAAGCTTAGCGAGGCTAAAACGCAGGGTCACCGCGAGTTCATGGCTGAAATGGAAACCTTAGGCAAGGTGAAGCATCAAAATCTCGTGGCACTGCTTGGATATTGCTCAATAGGTGAGGAGAAACTCCTTGTTTATGAATACATGGTAAATGGGAGCTTAGATCTTTGGTTGAGGAATAAGACTGGGGCCCTTGAAATCCTTGACTGGAACAAACGTTACAAAATTGCAACTGGCGCAGCTCGAGGATTGGCTTTCCTTCATCATGGTTTCATACCCCACATCATTCATAGGGATGTTAAAGCCAGCAACATCTTACTGAATGAAGACTTTGAGCCAAAGGTTGCAGACTTTGGACTGGCAAGACTGATCAGTGCTTGTGAGACTCATATCACCACTGATATTGCTGGAACGTTTGGTTACATTCCACCAGAGTATGGGCAGAGTGGGAGATCCACAACAAGAGGAGATGTCTACAGTTTCGGTGTCATTTTACTTGAACTTGTGACTGGTAAAGAGCCAACAGGACCAGATTTTAAGGAGATCGAAGGTGGTAACTTAGTTGGATGGGTTAGTCAGAAGATCAAGAAGGGGCAGGCTGCTGATGTTCTTGATCCAACAGTTCTTGATGCTGACTCAAAGCAGATGATGCTTCAAATGCTGCAAATTGCTTGTGTGTGCATATCTGATAATCCTGCAAGCAGGCCTAACATGCTTCAAGTGCACAAATTCTTGAAGGGGATCAGGGGAGAGTAG | 3645 | 0.4636 | MALPVNLVLSYFLVLHTLSAIADQTSDNLSLLSFKQALQNPHVLTVWHPATPHCHWLGVTCQLGRVTSLSLPSRNLRGTLSPSLFSLSSLSLLNLRDNHLSGEIPAELGGLLQLHTLRLGSNSLAGKIPPVVGHLTSLQTLDLSGNSLAGEVPESVGNLTRLEFLDLSNNLLSGALPVSLFVGAKSLISIDISNNSFSGALPPEIGNWRNLSALYVGINKLSGTLPREIGLLSKLEILYSPSCSIEGPLPEEMAKLKSLTKLDLSYNPLRCSIPRFIGELESLEILDLVFSQLNGSVPAELGNCKNLRSVMLSFNSLSGSLPEELSELPMLTFSAEKNQLHGPLPSWLGKWANVDSLLLSANRLSGVIPPELGNCSVMEHLSLSSNLLTGPIPWELCNAASLLEVDLDDNFLSGTIDNVFVKCKNLTQLVLMNNQIVGSIPEYLSELPLMVLDLDSNNFSGKIPSGLWNSSTLMEFSAANNRLEGSLPMEIGNAVMLERLVLSNNRLTGAIPKEIGSLLSLSVLNLNGNMLEGNIPTELGDCTSLTTLDLGNNQLNGSIPEKLVELSQLQCLVLSHNNLSGAVPAKKSSYFRQLSIPDLSFVQHLGVFDLSYNRLSGPIPDELGNCVVVVDLLVSNNMLSGSIPKSLSRLTNLTTLDLSGNLLSGSIPPELGGALKLQGLYLGQNQLSGAIPESFGKLSSLVKLNLTGNKLSGPIPVSFGNMKGLTHLDLSCNELSGELPSSLSGVQSLVGLYVQNNKLSGQVGDLFSNPMTWRIETVNLSVNFFNGNLPPSLGNLSYLTNLDLHRNMLTGEIPLDLGDLMQLEYFDVSGWKGPYQKMASGIGRSALDNAWRLAGIAVALTLLTLSIAFVLHRWITKRQSDPEEFEERKLNSYVDHNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVNILEATDNFSKANIIGDGGFGTVYKATLPNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVALLGYCSIGEEKLLVYEYMVNGSLDLWLRNKTGALEILDWNKRYKIATGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKIKKGQAADVLDPTVLDADSKQMMLQMLQIACVCISDNPASRPNMLQVHKFLKGIRGE | 1214 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g02281 | 1214 | SUPERFAMILY | L domain-like | 28 | 332 | - | - | |
Cca02g02281 | 1214 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 335 | 420 | - | - | |
Cca02g02281 | 1214 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 421 | 754 | - | - | |
Cca02g02281 | 1214 | SUPERFAMILY | Protein kinase-like (PK-like) | 917 | 1208 | IPR011009 | - | |
Cca02g02281 | 1214 | Gene3D | Phosphorylase Kinase; domain 1 | 899 | 1011 | - | - | |
Cca02g02281 | 1214 | Pfam | Leucine rich repeat | 651 | 711 | IPR001611 | GO:0005515 | |
Cca02g02281 | 1214 | Pfam | Leucine rich repeat | 497 | 555 | IPR001611 | GO:0005515 | |
Cca02g02281 | 1214 | Pfam | Leucine rich repeat | 113 | 172 | IPR001611 | GO:0005515 | |
Cca02g02281 | 1214 | Pfam | Leucine rich repeat N-terminal domain | 26 | 61 | IPR013210 | - | |
Cca02g02281 | 1214 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1058 | 1070 | IPR008271 | GO:0004672|GO:0006468 | |
Cca02g02281 | 1214 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 871 | 1214 | - | - | |
Cca02g02281 | 1214 | PRINTS | Leucine-rich repeat signature | 162 | 175 | - | - | |
Cca02g02281 | 1214 | PRINTS | Leucine-rich repeat signature | 650 | 663 | - | - | |
Cca02g02281 | 1214 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 774 | 828 | - | - | |
Cca02g02281 | 1214 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 103 | 314 | - | - | |
Cca02g02281 | 1214 | Pfam | Protein tyrosine and serine/threonine kinase | 939 | 1208 | IPR001245 | GO:0004672|GO:0006468 | |
Cca02g02281 | 1214 | SMART | LRR_sd22_2 | 159 | 180 | - | - | |
Cca02g02281 | 1214 | SMART | LRR_sd22_2 | 423 | 446 | - | - | |
Cca02g02281 | 1214 | SMART | LRR_sd22_2 | 256 | 282 | - | - | |
Cca02g02281 | 1214 | SMART | LRR_sd22_2 | 722 | 748 | - | - | |
Cca02g02281 | 1214 | SMART | LRR_sd22_2 | 542 | 568 | - | - | |
Cca02g02281 | 1214 | SMART | LRR_sd22_2 | 650 | 665 | - | - | |
Cca02g02281 | 1214 | SMART | LRR_sd22_2 | 135 | 158 | - | - | |
Cca02g02281 | 1214 | Pfam | Leucine Rich Repeat | 725 | 745 | IPR001611 | GO:0005515 | |
Cca02g02281 | 1214 | Pfam | Leucine Rich Repeat | 258 | 279 | IPR001611 | GO:0005515 | |
Cca02g02281 | 1214 | ProSitePatterns | Protein kinases ATP-binding region signature. | 942 | 965 | IPR017441 | GO:0005524 | |
Cca02g02281 | 1214 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1012 | 1214 | - | - | |
Cca02g02281 | 1214 | ProSiteProfiles | Protein kinase domain profile. | 936 | 1208 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g02281 | 1214 | SUPERFAMILY | L domain-like | 336 | 600 | - | - | |
Cca02g02281 | 1214 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 774 | 828 | - | - | |
Cca02g02281 | 1214 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 103 | 314 | - | - | |
Cca02g02281 | 1214 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 335 | 420 | - | - | |
Cca02g02281 | 1214 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 421 | 754 | - | - | |
Cca02g02281 | 1214 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 871 | 1214 | - | - | |
Cca02g02281 | 1214 | SUPERFAMILY | L domain-like | 595 | 831 | - | - | |
Cca02g02281 | 1214 | Gene3D | Ribonuclease Inhibitor | 181 | 332 | IPR032675 | - | |
Cca02g02281 | 1214 | Gene3D | Ribonuclease Inhibitor | 592 | 832 | IPR032675 | - | |
Cca02g02281 | 1214 | Gene3D | Ribonuclease Inhibitor | 333 | 591 | IPR032675 | - | |
Cca02g02281 | 1214 | Gene3D | Ribonuclease Inhibitor | 24 | 180 | IPR032675 | - | |
Cca02g02281 | 1214 | SMART | serkin_6 | 936 | 1208 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 722 | 746 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 650 | 674 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 159 | 183 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 796 | 820 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 135 | 158 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 87 | 111 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 698 | 721 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 256 | 280 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 518 | 542 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 602 | 626 | IPR003591 | - | |
Cca02g02281 | 1214 | SMART | LRR_typ_2 | 543 | 566 | IPR003591 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g02281 | Cca-Chr2 | 43317213 | 43321016 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g02281 | 21 | 1211 | Receptor kinase-like Gene Family | AT5G07280 | 62.000 | 0.0 | 1420 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Cca02g02281 | PK_Tyr_Ser-Thr | 3.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g02281 | - | - | gmx:100780446 | 2065.43 |