Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02255 ATGTGTGCAGTCAAGGAGGTTACCCTGTTTTCAGATGATCCTAAGTCTATGGAAAGTGCTAAGCAATTTATGCAGGAAATTCATTTATTAAGCCGTTTACAGCATCCAAATATTGTGCAGTATTATGGTTCTGAAACGGTTGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCTATACATAAACTTCTTCGAGAATATGGGCAGTTTGGTGAACTAGTTATTCGTAGTTATACTCAACAAATTTTATCAGGGCTTGCTTATTTACACGCTAAAAATACTCTGCATAGGGACATCAAAGGAGCAAATATACTGGTAGATCCAAATGGCCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAACATGTAAGCCTAGAGATAATTACTATCTGGTATCCATTATATCTACATTTAAGCTAA 429 0.373 MCAVKEVTLFSDDPKSMESAKQFMQEIHLLSRLQHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLREYGQFGELVIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNGRVKLADFGMAKHVSLEIITIWYPLYLHLS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02255 142 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 129 - -
Cca02g02255 142 Pfam Protein kinase domain 2 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02255 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02255 142 SMART serkin_6 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02255 142 SUPERFAMILY Protein kinase-like (PK-like) 2 130 IPR011009 -
Cca02g02255 142 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 129 - -
Cca02g02255 142 Gene3D Transferase(Phosphotransferase) domain 1 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02255 Cca-Chr2 43116194 43117122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02255 1 129 MAP Kinase Kinase Kinase AT1G63700 82.946 4.27e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Cca02g02255 Pkinase 1.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02255 K20717 - ccaj:109795280 288.115