Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02250 ATGGGGTTTTTACTACTATCAGGGCTTCTTGTTGCCTTCTTGTCACTACTTTGCCTCTTCTTGCTCTTGATACTAACATTTTCTTGGTGGCTTTTCCCTAACCAAACACTTAAGAAGCTTAAGAAATGTGGGTTGGGAGGGCCAACCCCAAGTTTTCCCCTCGGAAACATCAAAGAAATGAAAAAAGACATTCAATCTTCGGTTGTTTCCTCAAACCTACCACATGATATACACTCTTACGTTTTCCCCTACTTTTCTAGCTGGCAAAAATCACACGGTAAGGTGTTCGTGTACTGGTTGGGGACAGAGCCATTTCTGTACGTTTCAGAGCCAGAGTTTTTGAAGAAAATGTCAACAGTGGTGATGGCACAGAAATGGGGAAAACCAAGTGTGTTTAGAAATGACAGAGACCCCATGTTTGGGAGTGGTTTGGTCATGGTTGAGGGCAATGATTGGGTTCGTCACAGGCACATTGTTGCCCCAGCATTCAATCCCATTAACTTGAAGGCCATGGCAAACATGATGGTTGAATCCACGAACCAAATGATAGATAGATGGTCTACCCAAATAAACATGGGCAACCCCGAAATCGACGTGGAGAAAGAGATTATAGCAACCGCTGGTGAGATCATAGCAAGAACAAGTTTTGGCATGAAAGACAACAATGCAAGAGACGCCATCAATAAATTACGTGCCTTGCAAATGACTCTCTTCAAGACCAATCGCTACGTAGGGGTTCCCTTTGGCAAGTATTTTAACGTCAAGAAAACCTTAGAGGCCAAGAAACTCGGAAAGCAAATCGATGAACTCTTGTTGTCCATCATAGAGGCTCGCAGGAATTCATCCACGAAGAATTCTCAACAAGATTTGTTAGGTTTATTGCTTCAAAATAATGAAGTTGATGGCCGGTTTGGAAAGACATTAACATCAAGAGAAGTGGTTGATGAATGCAAGACCTTCTTCTTCGGTGGCCATGAAACCACAGCACTTGCTATCACGTGGACTTTGTTGCTTCTAGCCATGCACGAAGATTGGCAAAATCAGTTGAGAGATGAGATAAGACAAGTGGTGGGTAGTGAGAAACTTGATATCACCTTGCTTTCTGGTTTAAAGAAGATGAAATGGGTTATGAATGAAGTTCTAAGACTATACCCACCAGCACCCAATGTGCAAAGGCAAGCAAGGGAAGACATAAAAGTTGATGATATAACAGTGCCTAATGGAACCAACATGTGGATAGACGTGGTAGCGATGCACCATGACCCTGAATTATGGGGAAAGGATGCGAACGAGTTCAGACCAGAAAGGTTCATGGATGATGTGAATGGTGGATGCAAGCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGGAATTTGACCTTTATGGAGTACAAGATTGTATTAACCCTTCTTCTCTCTAGGTTTACTTTTAAGCTATCACCAGGTTACAATCATTCACCATCTATTATGCTTTCCCTAAGGCCAAGTTATGGACTTCCACTCATAGTTCAGCCCCTTTAG 1542 0.4274 MGFLLLSGLLVAFLSLLCLFLLLILTFSWWLFPNQTLKKLKKCGLGGPTPSFPLGNIKEMKKDIQSSVVSSNLPHDIHSYVFPYFSSWQKSHGKVFVYWLGTEPFLYVSEPEFLKKMSTVVMAQKWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMANMMVESTNQMIDRWSTQINMGNPEIDVEKEIIATAGEIIARTSFGMKDNNARDAINKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKQIDELLLSIIEARRNSSTKNSQQDLLGLLLQNNEVDGRFGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLRDEIRQVVGSEKLDITLLSGLKKMKWVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNMWIDVVAMHHDPELWGKDANEFRPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKLSPGYNHSPSIMLSLRPSYGLPLIVQPL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02250 513 Coils Coil 260 280 - -
Cca02g02250 513 SUPERFAMILY Cytochrome P450 77 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 508 - -
Cca02g02250 513 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 Pfam Cytochrome P450 83 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02250 513 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 6 508 - -
Cca02g02250 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02250 Cca-Chr2 43065814 43068251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02250 12 513 Cytochrome P450 AT5G52400 60.392 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02250 - - gmx:100785284 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02250 02 43065814 43068251 Cca08g00668 08 12377938 12382058 PCT