Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02249 aTGGATTTTCTAGGGCTAGTTGGGGTTCTTGTTGCTTTCTTGGTAGCACTTTGCCTCTTCTTGCTCTTGATACTAACATTTTCTTGGTGGGTTTTCCCTAACCAAACACTTAACAAGCTTAAGAAATGTGGGTTGGGAGGGCCAACCCCAAGTTTTCCCCTCGGAAACATTAAAGAAATGAAAAAAAACATTCAATCATCGGTTGTATCCTCAAACCTACCACATGATATACACTCTTACGTTTTCCCCTACTTTTCTAGCTGGCAAAAATCGCATGGTAAGGTGTTCGTGTACTGGTTGGGGACAGAGCCATTTCTGTACGTTTCAGAGCCAGAGTTTTTGAAGAAAATATCAACAGTGGTGATGGCAAAGAAATGGGGAAAACCAAGTGTGTTCAGAAATGACAGAGACCCTATGTTTGGGAGTGGTTTGGTCATGGTTGAGGGCAACGATTGGGTTCGTCACAGGCACATTGTTGCCCCAGCATTCAATCCCATTAACTTGAAGGACATGGCAAACATGATGGTTGATTCCACGAATCAAATGATAGAAAGATGGGTTAGACAAATAAACTCGGGAAACCCCGAATTTGACATGGAAAGAGAGATCATAGCAACAGCTGGAGAGATCATAGCAAGAACAAGTTTTGGCATGAAAGATGACAACGCAAGAGATGTTTTCGACAAATTACGAGCTTTGCAAATGACTCTCTTTCAGACTAATCGATATGTAGGAGTTCCCTTTGGCAAGTGTTTCAACGTCAAGAAAACGTTAGAGGCCAAGAAACTTGGGAAAGAAATCGATGAGCTCTTGTTGTCCATCATAGAATCTCGGAAGAATTCATCCACCAAGAATTCTCAACGAGATTTGTTAGGTTTGTTGCTTCAGGAAAACAATCAGGTTGATGGCAGGCTAGGGAAGACATTAACATCGCGAGAAGTTGTTGATGAATGCAAGACCTTCTTCTTTGGTGGCCATGAAACCACAGCACTTGCCATCACATGGACTTTGTTGCTTCTCGCCATGCATGAAGACTGGCAAAACCAACTGAGAGATGAGATAAGAGAAGTGGTGGGGGAGACAGAAGAACTTGATATTTCCATGCTTGCTGGTTTAAAGAAGATGAAATGGGTTATGAATGAAGTTCTAAGACTATACCCACCAGCACCCAATGTGCAAAGGCAAGCAAGGGAAGACATAAAAGTTGATGATATAACAGTGCCTAATGGAACCAACATGTGGATAGACGTGGTAGCGATGCACCATGACCCTGAATTATGGGGAAAGGATGCGAACGAGTTCAGACCAGAAAGGTTCATGGATGATGTGAATGGTGGATGCAAGCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGGAATTTGACCTTTATGGAGTACAAGATTGTATTAACCCTTCTTCTCTCTAGGTTTACTTTTAAGCTATCACCAGGTTACAATCATTCACCATCTATTATGCTTTCCCTAAGGCCAAGTTATGGACTTCCACTCATAGTTCAGCCCCTTTAG 1548 0.4251 MDFLGLVGVLVAFLVALCLFLLLILTFSWWVFPNQTLNKLKKCGLGGPTPSFPLGNIKEMKKNIQSSVVSSNLPHDIHSYVFPYFSSWQKSHGKVFVYWLGTEPFLYVSEPEFLKKISTVVMAKKWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKDMANMMVDSTNQMIERWVRQINSGNPEFDMEREIIATAGEIIARTSFGMKDDNARDVFDKLRALQMTLFQTNRYVGVPFGKCFNVKKTLEAKKLGKEIDELLLSIIESRKNSSTKNSQRDLLGLLLQENNQVDGRLGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLRDEIREVVGETEELDISMLAGLKKMKWVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNMWIDVVAMHHDPELWGKDANEFRPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKLSPGYNHSPSIMLSLRPSYGLPLIVQPL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02249 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Cca02g02249 515 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 Gene3D Cytochrome P450 29 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 510 - -
Cca02g02249 515 SUPERFAMILY Cytochrome P450 77 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 Pfam Cytochrome P450 83 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 5 510 - -
Cca02g02249 515 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02249 515 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02249 Cca-Chr2 43042876 43046319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02249 12 515 Cytochrome P450 AT5G52400 60.547 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02249 - - gmx:100785284 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02249 02 43042876 43046319 Cca02g02249 02 43042876 43046319 ECH
Cca08g00668 08 12377938 12382058 Cca02g02249 02 43042876 43046319 PCT