Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02247 ATGAACCTCGCCGTGGCGTTCGCATTCGTGTTTCTAACTACGGTGGCGCCATGGCGCGTTCGCTCGCAGGAACAGAGGCTTCTCGTGAACATGACGCTGGTTCCGAACGCTCGTGCTAGCCGTGCTCTTTGTTTGGACGGAAGTTTACCGGCGTATCATTTGCACAGAGGATTTGGAGCTGGCCAAGACAACTGGCTTCTACAATTCGAGGGAGGTGGATGGTGCAACGACTTGACATCATGTTTGGAGAGAGCCAAAACTAGGAGGGGTTCTACACGTTATATGACCAAGTGGGAGGTTTTCTCTGGTATCTTAAGCAATAATGCTACCCTTAATCCAGATTTTTACAATTGGAACCGTGTGAAGCTGAGATATTGTGATGGAGCTTCATTTACCGGAGACGCTGTGTTCAGTAACAGGACAACAACACTTTATTTCAAAGGTCAGAAGATTTGGGAAGCCATTATTCGCGACCTTCTACCACAAGGTTTGGGAAAGGCACGAAAGGCTTTACTTTCAGGTTGCTCAGCTGGAGGTTTAGCAACCTTTCACCATTGTGACGACTTTGCCAAGTATTTGCCAAAGAATGCTAGTGTTAAATGCTTGAGTGATGCCGGGTTTTTTCTTGACGAAAGAGACATTAGTTTAAACCACACTATGAGGTATTTCGTCAAAAGTCTAGTTCAATTGCAGGGGATAGAACAGAACCTGAATAGAAACTGTACCAGAGCACTGTACTTTCCAGACTTGTGCTTCTTTCCACAATATGCATTGAGATACATATCAACACCATATTTTATCTTAAACTCTGCCTATGATGTATACCAATTCCATCATATATTGGTGCCACCCTCTGCTGATATGCATGGTCACTGGAACCGTTGCAAGCTAAACCCTGCGGAATGCACACCTGCACAAATCAATACATTGCAAGGTTTTAGGCTCCACATGCTTGCGGCTTTGAGACCGTTCTATATGAATTCAAGAATAGGGGGGATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAACTGCAAGAAACATGGTTTGGGGCTGATTCTCCAACAATAAACGAGAAGACTATTGCAGAAGCGGTTGGCGATTGGTATTTTAGTAGAGACAGAACCAAGAAAATAGACTGTGCATATCCGTGTGATGCAACTTGTCATAATCTTATTCCATAA 1188 0.4394 MNLAVAFAFVFLTTVAPWRVRSQEQRLLVNMTLVPNARASRALCLDGSLPAYHLHRGFGAGQDNWLLQFEGGGWCNDLTSCLERAKTRRGSTRYMTKWEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDAVFSNRTTTLYFKGQKIWEAIIRDLLPQGLGKARKALLSGCSAGGLATFHHCDDFAKYLPKNASVKCLSDAGFFLDERDISLNHTMRYFVKSLVQLQGIEQNLNRNCTRALYFPDLCFFPQYALRYISTPYFILNSAYDVYQFHHILVPPSADMHGHWNRCKLNPAECTPAQINTLQGFRLHMLAALRPFYMNSRIGGMFINSCFAHCQSELQETWFGADSPTINEKTIAEAVGDWYFSRDRTKKIDCAYPCDATCHNLIP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02247 395 PANTHER PECTIN ACETYLESTERASE 9 22 395 - -
Cca02g02247 395 Pfam Pectinacetylesterase 22 375 IPR004963 GO:0016787
Cca02g02247 395 PANTHER NOTUM-RELATED 22 395 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02247 Cca-Chr2 42993641 43006444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02247 1 395 Carbohydrate Esterase AT5G23870 66.499 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02247 K19882 - gmx:100802358 734.561