Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02246 ATGAACTTTGTCGTGGCTTTCGTATTCTTGTATCTAACCACTTTAGCGCCATGTCACGTTCGCTCGCAACAGAGACATCTCATCAAAATGACGCTGGTTAGGAATGCTCGTGCTACCAATGCACTTTGTTTGGACGGGAGTTTACCGGCGTATCATTTGGACAGAGGATTTGGAGATGGCAAAGACAATTGGCTTCTACAATTTGAGGGAGGTGGATGGTGCAATGACCTGAAGTCATGCTTGGAGAGAGCCAAAACTAGGAGGGGCTCTACTAGTTATATGAGCAAGTTCGAGGATTTCAATGGTATTTTAAGCAACAGTGCCACCCTTAATCCAGGATTTTACAACTGGAACCGTGTTAAGCTGAGATATTGTGATGGAGCTTCATTTACCGGAGACGCTGTGTTCACTGACAAGAACACAACACTTTATTTCAAAGGGCAAAAGATTTGGGATGCCATCATTCGCGATCTTCTACCACAAGGTTTGGGAAAGGCACAAAAGGCTTTGCTTTCAGGTTGCTCAGCAGGAGGTTTAGCAACTTTTCACCATTGTGATGACTTTGCCAAGTATTTGCCAACAAATGCAACTGTTAAGTGCTTGAGTGATGCTGGTTTTTTTCTTGACGAAAGAGACATTAGTTTGAACTACACTTTTAGGTTGTTCTTCAAAAATGTAGTTCAATTGCAGGGAGCAGAGCAGAACCAGAATAAAAATTGTACCATGGCACTCAAGTCTCCAGAGTTGTGCTTCTTTCCACAATATGCGTTGAGTTACATATCAACACCATATTTTATCTTGAACTCTGCCTATGATGTATTCCAATTCCATAATATATTAGTGCCACCCTCTGCTGACTTACGCGGATACTGGAACAGATGCAAGCTGAACCCTGCAGCGTGCACACCAGACCAAATTAATACATTGCAAGGTTTTAGGCTTGACATGCTTGCTGCTTTGAAACCGTTCAATACGAATTCAAGAACAGGAGGGATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAACTGCAAGAAACATGGTTTGCCGCTGATTCTCCAAGAATAAACAAGAAGACTATTGCAGAAGCAGTTGGTGATTGGTATTTTAGTAGAAACACTAGCAAGGAAATAGATTGTGCATATCCATGTGATTCAACTTGCCATAATCTTATACCATAA 1185 0.4152 MNFVVAFVFLYLTTLAPCHVRSQQRHLIKMTLVRNARATNALCLDGSLPAYHLDRGFGDGKDNWLLQFEGGGWCNDLKSCLERAKTRRGSTSYMSKFEDFNGILSNSATLNPGFYNWNRVKLRYCDGASFTGDAVFTDKNTTLYFKGQKIWDAIIRDLLPQGLGKAQKALLSGCSAGGLATFHHCDDFAKYLPTNATVKCLSDAGFFLDERDISLNYTFRLFFKNVVQLQGAEQNQNKNCTMALKSPELCFFPQYALSYISTPYFILNSAYDVFQFHNILVPPSADLRGYWNRCKLNPAACTPDQINTLQGFRLDMLAALKPFNTNSRTGGMFINSCFAHCQSELQETWFAADSPRINKKTIAEAVGDWYFSRNTSKEIDCAYPCDSTCHNLIP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02246 394 PANTHER PECTIN ACETYLESTERASE 9 20 394 - -
Cca02g02246 394 Pfam Pectinacetylesterase 22 375 IPR004963 GO:0016787
Cca02g02246 394 PANTHER NOTUM-RELATED 20 394 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02246 Cca-Chr2 42978185 42990435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02246 1 394 Carbohydrate Esterase AT5G23870 64.141 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02246 K19882 - gmx:100802358 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02246 02 42978185 42990435 Cca02g02246 02 42978185 42990435 ECH