Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02224 ATGTCGGTGATTATCGATTCAAACATCAAATCCAACATTTTTCGGGTCATCGCAGGAGGAAACACTGCACCAGATCATGACGACGTCACAGTAGAAGATAATGTGTGTGACTCAAGGAATTCCATCTTCGAAGTTGAACGCGTTTCTTCTGAGGCCATGGCTGATATGAAATCTGCCGTTGATTGCATGGTTTCAAACAATTACACCAGAGAATGCGTCTATATTTACACGATGATGAGAAAATCAATCATCGACTAA 258 0.4109 MSVIIDSNIKSNIFRVIAGGNTAPDHDDVTVEDNVCDSRNSIFEVERVSSEAMADMKSAVDCMVSNNYTRECVYIYTMMRKSIID 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02224 85 Gene3D Exocyst complex component Exo70 11 85 - -
Cca02g02224 85 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 85 IPR004140 GO:0000145|GO:0006887
Cca02g02224 85 SUPERFAMILY Cullin repeat-like 40 85 IPR016159 -
Cca02g02224 85 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 25 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02224 Cca-Chr2 42756333 42756778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02224 9 85 EXO70 exocyst subunit family AT3G09520 28.889 2.34e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02224 - K07195 gmx:106795635 81.6481