Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02219 ATGGCGTCAACTCTCTTCACCACCACAATCTTCAAGCCCTCACCCCCTCCCCCTAACTTCTTCAACCCCTTAACATCTTCTCATCACTCTACAATTCTCCCACTTCGACCCCACAAAAGAATCACTTCCTTCACCCTTTGCCTCCTCACCGAGGACCCCAAACGGGACATCCACATCAAAACGGAGGAACAACAACAACAACAGCTGAATGTGACAGAGAAATTGGCCCGGAAGAGGTCCCAGAGGTTCACTTACCTCGTTGCTGCCCTCATGTCTAGCTTTGGCGTCACGTCCATGGCAGTCTTCGCCGTTTATTATAGATTCTCATGGCAAGTCCAGGGTGGAGATGTTCCATGGTCTGAAATGTTAGGCACACTTTCCCTCTCCGTCGGTGCTGTCGTGGCTATGGAATTTTGGGCAAGATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGTCTCACCATCGACCAAGAGAGGGACCATTCGAGCTTAACGACGTTTTTGCGATAATCAACGCTGTCCCTGCGATCGCTCTTCTGTCGTACGGTTTTTTCCACAAGGGTCTGATCCCGGGCCTCTGTTTTGGTGCAGGTCTCGGAATCACGGTGTTTGGGATGGCGTACATGTTTGTCCACGATGGATTGGTTCATAAGAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTACTTCAGAAGAGTTGCTGCTGCTCACCAACTCCACCATTCGGACAAATTCAACGGGGTGCCATATGGGCTGTTTCTGGGACCCAAGGAAGTTGAAGAAGTGGGAGGGCTAGAAGAACTAGAGAAAGAGATAAGTAGGAGAACAAGGTCCCGTTCATGA 861 0.5087 MASTLFTTTIFKPSPPPPNFFNPLTSSHHSTILPLRPHKRITSFTLCLLTEDPKRDIHIKTEEQQQQQLNVTEKLARKRSQRFTYLVAALMSSFGVTSMAVFAVYYRFSWQVQGGDVPWSEMLGTLSLSVGAVVAMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKEVEEVGGLEELEKEISRRTRSRS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02219 286 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 31 283 IPR045019 GO:0016491
Cca02g02219 286 Pfam Fatty acid hydroxylase 132 259 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cca02g02219 286 PANTHER BETA-CAROTENE HYDROXYLASE 31 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02219 Cca-Chr2 42708499 42710648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02219 1 202 Chloroplast and Mitochondria Gene Families AT4G25700 55.251 1.36e-80 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02219 K15746 - gmx:547758 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02219 02 42708499 42710648 Cca08g00716 08 13533484 13536444 ECH
Cca02g02219 02 42708499 42710648 Cca02g02219 02 42708499 42710648 ECH
Cca08g00716 08 13533484 13536444 Cca02g02219 02 42708499 42710648 PCT