Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02205 ATGTCTTGCCCCACTCTTTATCATCACATCCACCATGGTTGTACTCAAACACATGGAACCCATCTCACTCCAACTCAAACCTCTCCCACAATGGAAGATGAGTCACCAACACCTCCAAAATCCTACAAACTAACAGCCACCGCCATATCCTACACCAAGTCCTTCTTCAAACACTGCACCACCACCCCTCCAACCTACATCCTCAAAGACATCTCCCTAACAGCCCTTCCGGGCCAAATCCTGGCCGTGGTGGGCCCCAGCGGCGCCGGCAAGTCCACCCTCCTCGACATCCTCGCCGCCCGCACCCTCCCCTCCCACGGCACTCTCTCCCTCAACGCCGCCCCCCTCCTCCCCTCCACCTTCCGCAAACTCTCCGCCTACGTCCCCCAGCACGACCACTCCCTCCCTCTCCTCACCGTCCGCGAAACCTTCCTCTTCGCCGCCACCCTCCTCCACCCCAAAACCCTAAACCTCTCCTCCCTCGTCTCCTCCCTCCTCTCCCAGCTCAGCCTCTCCCACCTCGCCAACACCCGCCTCGCCCACGCCCTCTCGGGAGGCGAACGCCGCCGCGTCTCCATCGGCCTCAGCCTCCTCCATGACCCCGCCGTCCTCCTCCTCGACGAGCCCACCTCTGGCCTCGACAGCACTTCAGCCTTCAAAGTCATGCAAATCCTCAAACAAACTTCCGTCTCTCGCAACAGAACCATTATCCTCTCTATTCACCAACCTAGCTTCAAGATCCTCTCATGCATTGACAACATCTTGTTGCTTTCCAAAGGAAGCGTCGTTCACCACGGATCCGTTGCTTCCTTACAGGCCTTTCTGCACTCCTATGGCTTCACCGTCCCTCACCAACTCAACGCCTTGGAATACGCCATGGAGATATTGAGCCAGTTGAATGATGTCAAAAAAGTTCAACCTGTCATCACTCCACCCAGCCTTCCTGAATCCCCTCAAAGCTCAACTTCCAGTAATTCTAGTGTTTGTGACGGTCGAGTAGAGATCAGGTTTAAGAGTTCTAGGGTGCATGAGATTTTCACTCTTTACATTAGGTTTTGGAAGATTATTTACCGAACGAGGCAACTTCTTTTGACCAACACTTTGGAAGCCCTTCTCGTGGGGCTTGTGTTGGGAACTATTTATATCAACATAGGGTTTGGTAAAGAAGGGATTGAGAAAAGGTTTGGTCTCTTTGCCTTCACTCTCACCTTTCTCTTATCTTCCACCACTGAAACGCTTCCCATCTTCATCAACGAGAGGCCAATCTTGCTCAGAGAAACTTCCAGTGGGGTTTACAGGCTTTCGTCTTACCTCATTGCAAACACACTTGTTTTCTTGCCCTACTTGTTCGTCGTTGCTGTTATATACTCTATCCCCGTTTACTTCCTTGTTGGTCTTTGTGCTTCGTGGCTTTCTTTTGTTTACTTTGTTTTGGTTATTTGGGTCATTGTTCTCACTGCAAACTCGTTCGTTCTCTTCTTGAGCTCTCTTGCACCAAACTACATTGCTGGGACTTCGCTCTTGACGGTGCTTCTTGCTGCGTTTTTTCTCTTCTCGGGCTACTTTATCTCCAAGGATAGCTTGCCCAAGTACTGGCTCTTCATGCACTTTTTCTCTATGTATAAATACGCTCTGGATGCTCTTCTCATCAACGAGTACTCGTGCTTGGCCACACGCTGTTTAATATGGTACCAAGAGAATCAACTGTGCATGGTTACCGGTGGTGATGTGTTGCAGAAGAAAGGGCTCAGAGAGAGTCAGAGGTGGACCAACGTGTATTTCTTGATCGGATTCTTCGTGATGTATCGTGTCCTTTGCCTCTTGGTTTTGATTAGGAGGGTTTCGAGGTCCAAAACTTAG 1860 0.5081 MSCPTLYHHIHHGCTQTHGTHLTPTQTSPTMEDESPTPPKSYKLTATAISYTKSFFKHCTTTPPTYILKDISLTALPGQILAVVGPSGAGKSTLLDILAARTLPSHGTLSLNAAPLLPSTFRKLSAYVPQHDHSLPLLTVRETFLFAATLLHPKTLNLSSLVSSLLSQLSLSHLANTRLAHALSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKQTSVSRNRTIILSIHQPSFKILSCIDNILLLSKGSVVHHGSVASLQAFLHSYGFTVPHQLNALEYAMEILSQLNDVKKVQPVITPPSLPESPQSSTSSNSSVCDGRVEIRFKSSRVHEIFTLYIRFWKIIYRTRQLLLTNTLEALLVGLVLGTIYINIGFGKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLFVVAVIYSIPVYFLVGLCASWLSFVYFVLVIWVIVLTANSFVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKDSLPKYWLFMHFFSMYKYALDALLINEYSCLATRCLIWYQENQLCMVTGGDVLQKKGLRESQRWTNVYFLIGFFVMYRVLCLLVLIRRVSRSKT 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02205 619 Pfam ABC-2 type transporter 241 305 IPR043926 GO:0140359
Cca02g02205 619 Pfam ABC transporter 68 211 IPR003439 GO:0005524
Cca02g02205 619 SMART AAA_5 77 261 IPR003593 -
Cca02g02205 619 Pfam ABC-2 type transporter 344 553 IPR013525 GO:0016020|GO:0140359
Cca02g02205 619 MobiDBLite consensus disorder prediction 15 39 - -
Cca02g02205 619 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Cca02g02205 619 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 50 284 IPR003439 GO:0005524
Cca02g02205 619 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 33 614 - -
Cca02g02205 619 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 614 - -
Cca02g02205 619 MobiDBLite consensus disorder prediction 16 39 - -
Cca02g02205 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 282 IPR027417 -
Cca02g02205 619 Gene3D - 53 306 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02205 Cca-Chr2 42566328 42568462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02205 25 267 Calmodulin-binding Proteins AT2G36910 28.736 1.57e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02205 K05681 - gmx:100790712 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02205 02 42566328 42568462 Cca02g02205 02 42566328 42568462 ECH