Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02203 ATGGCGTCAGACAAAATAGAAGAGAAGTTCCACGTCGACCACAACTCCGATTCCGATTCTTATTCCAGTTCCGACGACGACCACACCACCGGATCCAACGTTTACCGCCTCTTCGGCCGCGATCAGCCCGTCCATAAGGTCCTGGGCGGTGGAAAACCTGCTGATATTTTGCTATGGAGGAACAAGAGAAGCACCGGAATTGTACTTGGTGCTGGCACTGCCTTTTGGGTTTTCTTTGAGTTGATGGAGTACCACCTCATAACTTTTCTTTGCCATTTAATGATTCTCTCTCTGGCCGCACTTTTCTTGTGGTCCAATGCATCTGTCTTTATCCACAAGTCTCCACTGCAAATCCCGCATATAGCAATTCCTGAGGACTGCTTTGTCGAGGCTGCTTCCGCTTTAAGAACTGAAATTAACCGAGCCTTAGTTATTTTGCGGGAAATCGGAACTGGGCGAGATTTAAAGAAGTTCCTTAGCATTATTGCTGTATTGTGGGTTATCTCGGTTATTGGGAGTTGGTTCAACTTCTTGACCTTGTTTTACCTATTCTTTTTGTCGCTGTTCACATTGCCACTGGTGTATGAGAAATATGAAGACCAGGTTGATGCAATAGGTGAGAAGGCGATGATTGAGATAAAAAAGCAGTATGCAGTGTTTGATGCTAAGGTTTTGAGCCAGATACCAATAGCGGGCATGAAAAAGGATTAG 711 0.4515 MASDKIEEKFHVDHNSDSDSYSSSDDDHTTGSNVYRLFGRDQPVHKVLGGGKPADILLWRNKRSTGIVLGAGTAFWVFFELMEYHLITFLCHLMILSLAALFLWSNASVFIHKSPLQIPHIAIPEDCFVEAASALRTEINRALVILREIGTGRDLKKFLSIIAVLWVISVIGSWFNFLTLFYLFFLSLFTLPLVYEKYEDQVDAIGEKAMIEIKKQYAVFDAKVLSQIPIAGMKKD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02203 236 MobiDBLite consensus disorder prediction 1 24 - -
Cca02g02203 236 Pfam Reticulon 54 208 IPR003388 -
Cca02g02203 236 ProSiteProfiles Reticulon domain profile. 53 236 IPR003388 -
Cca02g02203 236 PANTHER RETICULON-LIKE PROTEIN 3 234 - -
Cca02g02203 236 MobiDBLite consensus disorder prediction 1 28 - -
Cca02g02203 236 PANTHER RETICULON 3 234 IPR045064 GO:0009617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02203 Cca-Chr2 42537127 42539045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02203 - K20721 gmx:100790190 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02347 01 52056444 52058319 Cca02g02203 02 42537127 42539045 ECH
Cca02g02203 02 42537127 42539045 Cca02g02203 02 42537127 42539045 ECH