Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02184 ATGCTCCCCATCCACAGGAAGAGCCTTCTACAGCGACCCCATACGCTTCCACGACCCCCTCACCAACGccaccgcctccttctcctcccgcttctccttctccatcctcccctcctcatcgccccctcccccctcttccccaccgcccccggcttcctcggcctcccctcctcccctctccccttcctcgccctccacttcgacaccacccgccaccgcaaccgcctcgccctccacctctcctccctcccctccctctccgccgacgcctcctccCAAGGCATCACCCTCACCAGCAACAAACTCATCACTGCATGGATCCACTACGCCCATGCACTCAACCTCCTCCGCGTCTGGCTTTCTTATTCCACCACCCGACCCCCCTCTCCCCTTCTCTCTTCCCAACTCGACCTCTCCCAAACCCTCAACCACTTCATGCACGTCGGATTCACCGCCTCTAATGGGGAAGGCTCTAGTCTCCACCTTCTTCACCGCTGCCACTTCAACACCTTTGCTTactacgacgaccacgaccacgacgacTCTCCTGAAGATGCAGACTGTTTCTTCTGTTATCAAGACCATGATTCCTCACGCTCCGATCTTCAGACTCAGAAGAGGAAAAAGATCGGTGAAATGGTTCTTGGCTTGGGAGGCTTGACGGCGTTTGTGGTGTCTCTTTTGGCGGCTATGTTCGTCGTCTGTGTTTTCTTGACAAAGAAGAAAGAGGGTGTTAGGGAAGGTGGACAGAGTTGTAGGAATATTCACACCAGTAATAGAGTGCCGACAAGGTTGTCGCTTTCGGAGATTAAGTCGGCTACGATGGGGTTTAACCGAGATAGGCTTGTTGGAGAGGGTGCTTCTGCCAAGGTTTATAGAGGGTACCTTCCCTTTGGAGGTGACGTGGCGGTCAAGAGGTTTGCGAGGGAGGGTAGTGGTTTGGACTGTTTGCACAACCCTTTCGCCACGGAGTTTGCCACCATGGTGGGTTACTTGCGCCACAAGAATTTGGTTCAGCTTAAGGGCTGGTGCTGTGAGGGGAATGAGTTGGTTTTGGTTTATGAGTTTCTCCCCAATGGGAGCCTCAACAAGGTTTTACACAGGAACTTCGGTTCTTGTATTGTTCTATCGTGGAGGCAAAGGTTAAATATTGTTCTCGGGGTGGCTTCTGCTCTCACCTATCTTCATGAGGAGTGTGAGAGGCAGATCATTCATAGGGATGTCAAGACCTGCAATATAATGCTTGATGCGGATTTCAATGCCAAGCTTGGGGATTTTGGGCTGGCTGAAgtgtatgagcacagttgtagcacaagggatgctactataccagcggggacaatggggtatctggctcctgagtatgtttattctggtgttcctactgcgaagactgatgtgtatagttttggggtggtggtgttggaggtggcaactgggaggaagcctgtggaggatgatggcactgtggttgcggattatgtgtggagcttgtgggaaaagaggaggctcattgaggctgctgatccaagattgatggggaagtttgatgcattggagatggagaggatgttacttgtgggtcttctttgtgtgcaccctgactatgagaagaggccaagagtgagagaagcagctagaattcttaagaaggaagcaccacttcctttgttgcctctcagtaaaccaagggtgaaaattgggcatatttgtcctaatgaTACGCCTGAGGCACAGAATGTTGTTGTTGGGGATTGGCTCAGCACAGATGAGGCTCCTTATTTGACCCCTAGAAGTCAGTTTTACTAG 1809 0.319 MLPIHRKSLLQRPHTLPRPPHQRHRLLLLPLLLLHPPLLIAPSPLFPTAPGFLGLPSSPLPFLALHFDTTRHRNRLALHLSSLPSLSADASSQGITLTSNKLITAWIHYAHALNLLRVWLSYSTTRPPSPLLSSQLDLSQTLNHFMHVGFTASNGEGSSLHLLHRCHFNTFAYYDDHDHDDSPEDADCFFCYQDHDSSRSDLQTQKRKKIGEMVLGLGGLTAFVVSLLAAMFVVCVFLTKKKEGVREGGQSCRNIHTSNRVPTRLSLSEIKSATMGFNRDRLVGEGASAKVYRGYLPFGGDVAVKRFAREGSGLDCLHNPFATEFATMVGYLRHKNLVQLKGWCCEGNELVLVYEFLPNGSLNKVLHRNFGSCIVLSWRQRLNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSCSTRDATIPAGTMGYLAPEYVYSGVPTAKTDVYSFGVVVLEVATGRKPVEDDGTVVADYVWSLWEKRRLIEAADPRLMGKFDALEMERMLLVGLLCVHPDYEKRPRVREAARILKKEAPLPLLPLSKPRVKIGHICPNDTPEAQNVVVGDWLSTDEAPYLTPRSQFY 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02184 602 PANTHER - 48 567 - -
Cca02g02184 602 Gene3D - 61 219 - -
Cca02g02184 602 Gene3D Phosphorylase Kinase; domain 1 239 356 - -
Cca02g02184 602 ProSiteProfiles Protein kinase domain profile. 277 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02184 602 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 171 IPR013320 -
Cca02g02184 602 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524
Cca02g02184 602 SUPERFAMILY Protein kinase-like (PK-like) 253 549 IPR011009 -
Cca02g02184 602 CDD STKc_IRAK 283 551 - -
Cca02g02184 602 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 48 567 - -
Cca02g02184 602 Pfam Legume lectin domain 40 172 IPR001220 GO:0030246
Cca02g02184 602 Pfam Protein kinase domain 278 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02184 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Cca02g02184 602 Gene3D Transferase(Phosphotransferase) domain 1 357 554 - -
Cca02g02184 602 SMART serkin_6 277 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02184 Cca-Chr2 42345455 42347360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02184 38 601 Receptor kinase-like Gene Family AT5G42120 51.443 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca02g02184 Pkinase 2.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02184 - - gmx:100783805 774.237