Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g02174 | ATGGATCCGAATTTCACCGGAGCTCCGTCGGATACGGCGGAGTTTGAATCGGAGAGCTTGCTCGACATCAGCTCCTTGGACATCGCCGACTGCTTCGACGATCTGCTCAAATTCGACTTGGAATCTTTTGATTTCAACATGCTTGAGTCGCTGCCGCCGCCGCCAAGCGCCGCCGTGGTGGGCGTGGATTCGGTGTCGTCGGAGCATTCGGTGGGGCCCACTGCGGGAGTGGACCGTGGGAAGTCGGTGGTGAGCGAGGAGATGGGCGGCGGCGGAGGGAAGAAGGCGGAGCGGCGGCGGCGGAACAAGATTCCCGTGGGCGCGTCCTCGAGGGCGTCGTTTAAGGGAGAGACGGTTTCTTTGGTGAAGAAGGCCCTCGCCCCTGAGCAGCTTGCTGAACTTGCTATCGTTGATCCTAAGAGGGTTAAGAGGATTCTTGCCAATAGGCAATCTGCTGCTAAATCCAAGGAGAGGAAAATGCGTCATATGCGTGAGTTACAAAAGAAGGTACAGTTGCTTAAAATTCAAACAACCGAGAAGGCTACAACTGTTACCATGCTTCAGCAAGAGAGTGCAGAAACCGCTGTTCGGTTGAGGGAGCTCACAATAACCAGAGATGCTATGCAACAAGAATTACAGATTAGAAAGGCTCTGAGCGAGGCGATTGAGGAAGAAGTTCAAAGCCTAAGGAAAGAAGATGATCATCTAGATGTTATATTGCGTGCTCGTTCTCTTACTGAGTTGCTCTCTTCCCAGATGCCTCCGCAGCAGTTTCACTATTCTCCATATGATCAACAAATACAGCTTCCAATGCCTGAAGCTAATCCTTTTCTTCCCTCTAGCCAGGGTTCCAGTGAGAGTTATGACCCTAACTTCTCAGACTTCAATCCCCCGAACTAG | 900 | 0.5189 | MDPNFTGAPSDTAEFESESLLDISSLDIADCFDDLLKFDLESFDFNMLESLPPPPSAAVVGVDSVSSEHSVGPTAGVDRGKSVVSEEMGGGGGKKAERRRRNKIPVGASSRASFKGETVSLVKKALAPEQLAELAIVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQQESAETAVRLRELTITRDAMQQELQIRKALSEAIEEEVQSLRKEDDHLDVILRARSLTELLSSQMPPQQFHYSPYDQQIQLPMPEANPFLPSSQGSSESYDPNFSDFNPPN | 299 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g02174 | 299 | Coils | Coil | 212 | 232 | - | - | |
Cca02g02174 | 299 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 138 | 201 | IPR004827 | GO:0003700|GO:0006355 | |
Cca02g02174 | 299 | Coils | Coil | 156 | 176 | - | - | |
Cca02g02174 | 299 | CDD | bZIP_plant_RF2 | 141 | 192 | IPR044759 | GO:0003700|GO:0006355 | |
Cca02g02174 | 299 | Gene3D | - | 138 | 200 | - | - | |
Cca02g02174 | 299 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 30 | 271 | - | - | |
Cca02g02174 | 299 | SMART | brlzneu | 136 | 200 | IPR004827 | GO:0003700|GO:0006355 | |
Cca02g02174 | 299 | MobiDBLite | consensus disorder prediction | 275 | 293 | - | - | |
Cca02g02174 | 299 | SUPERFAMILY | Leucine zipper domain | 140 | 192 | IPR046347 | GO:0003700|GO:0006355 | |
Cca02g02174 | 299 | MobiDBLite | consensus disorder prediction | 57 | 100 | - | - | |
Cca02g02174 | 299 | MobiDBLite | consensus disorder prediction | 256 | 299 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g02174 | Cca-Chr2 | 42136659 | 42141678 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g02174 | 25 | 230 | bZIP Transcription Factor Family | AT4G38900 | 38.462 | 2.41e-27 | 109 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Cca02g02174 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g02174 | K20557 | - | gmx:102664725 | 177.178 |