Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02174 ATGGATCCGAATTTCACCGGAGCTCCGTCGGATACGGCGGAGTTTGAATCGGAGAGCTTGCTCGACATCAGCTCCTTGGACATCGCCGACTGCTTCGACGATCTGCTCAAATTCGACTTGGAATCTTTTGATTTCAACATGCTTGAGTCGCTGCCGCCGCCGCCAAGCGCCGCCGTGGTGGGCGTGGATTCGGTGTCGTCGGAGCATTCGGTGGGGCCCACTGCGGGAGTGGACCGTGGGAAGTCGGTGGTGAGCGAGGAGATGGGCGGCGGCGGAGGGAAGAAGGCGGAGCGGCGGCGGCGGAACAAGATTCCCGTGGGCGCGTCCTCGAGGGCGTCGTTTAAGGGAGAGACGGTTTCTTTGGTGAAGAAGGCCCTCGCCCCTGAGCAGCTTGCTGAACTTGCTATCGTTGATCCTAAGAGGGTTAAGAGGATTCTTGCCAATAGGCAATCTGCTGCTAAATCCAAGGAGAGGAAAATGCGTCATATGCGTGAGTTACAAAAGAAGGTACAGTTGCTTAAAATTCAAACAACCGAGAAGGCTACAACTGTTACCATGCTTCAGCAAGAGAGTGCAGAAACCGCTGTTCGGTTGAGGGAGCTCACAATAACCAGAGATGCTATGCAACAAGAATTACAGATTAGAAAGGCTCTGAGCGAGGCGATTGAGGAAGAAGTTCAAAGCCTAAGGAAAGAAGATGATCATCTAGATGTTATATTGCGTGCTCGTTCTCTTACTGAGTTGCTCTCTTCCCAGATGCCTCCGCAGCAGTTTCACTATTCTCCATATGATCAACAAATACAGCTTCCAATGCCTGAAGCTAATCCTTTTCTTCCCTCTAGCCAGGGTTCCAGTGAGAGTTATGACCCTAACTTCTCAGACTTCAATCCCCCGAACTAG 900 0.5189 MDPNFTGAPSDTAEFESESLLDISSLDIADCFDDLLKFDLESFDFNMLESLPPPPSAAVVGVDSVSSEHSVGPTAGVDRGKSVVSEEMGGGGGKKAERRRRNKIPVGASSRASFKGETVSLVKKALAPEQLAELAIVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQQESAETAVRLRELTITRDAMQQELQIRKALSEAIEEEVQSLRKEDDHLDVILRARSLTELLSSQMPPQQFHYSPYDQQIQLPMPEANPFLPSSQGSSESYDPNFSDFNPPN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02174 299 Coils Coil 212 232 - -
Cca02g02174 299 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 138 201 IPR004827 GO:0003700|GO:0006355
Cca02g02174 299 Coils Coil 156 176 - -
Cca02g02174 299 CDD bZIP_plant_RF2 141 192 IPR044759 GO:0003700|GO:0006355
Cca02g02174 299 Gene3D - 138 200 - -
Cca02g02174 299 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 30 271 - -
Cca02g02174 299 SMART brlzneu 136 200 IPR004827 GO:0003700|GO:0006355
Cca02g02174 299 MobiDBLite consensus disorder prediction 275 293 - -
Cca02g02174 299 SUPERFAMILY Leucine zipper domain 140 192 IPR046347 GO:0003700|GO:0006355
Cca02g02174 299 MobiDBLite consensus disorder prediction 57 100 - -
Cca02g02174 299 MobiDBLite consensus disorder prediction 256 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02174 Cca-Chr2 42136659 42141678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02174 25 230 bZIP Transcription Factor Family AT4G38900 38.462 2.41e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca02g02174 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02174 K20557 - gmx:102664725 177.178