Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02158 ATGGCGTCGTCGAAGCTCATGCCGTCGTCCAATTCAAGAAAATCGGAGGCCTCTCCTTCCCCTTCTCCCACCCCACAATTCACCACCAACAACTTCATGCCCATCCCCGACGCCGCCCCCAAAACCGTCGACGACGTCTGGCGGGAGATCGTCGCCGGCGACCGCCGCGACTGCAAGGAGGAGGCCCCCGACGACGAGATGATGACGCTCGAGGACTTCCTCGTCAAGGCCGGCGCCGTCGACGACGACGACGGCACCGACCACGACGCTGACATCAAGATGCCAATGCCCCTCGGCAGCGGCGTCTTCTCCTTCGACCCCCTTCCCACGACGCCGTTTCCCGACGCCGCCGAAGGCTCCGTCATAGGGTTCGGAAACGGCGTGGAGGTGGTCGAAGGTGGGAGAGCGAAGAGAGCGCGTCCCGTTTTGGAGCAGTTGGACAAGGCCGCGCAACAGAGACAGAGGAGGATGATCAAAAACAGAGAGTCTGCTGCTAGGTCTAGGGAACGCAAGCAGGCTTACCAAGTTGAATTGGAGTCATTGGCGGTGAGACTAGAAGACGAGAATGACAAGCTAATCAAGGAAAAGGCTGAGAGGAAAAAGGAGAGGTACAAGCAGCTAATGGAAAAAGTACTCCCTATTGGGCAGAAGCAAAGGCCACCATGCGTACTCCGTAGAGCTCGCTCCTTACAATGGCTTTCACACTCAGCCACAATTCTAGTGGATGGATCTTCAGAGTGGAAGAATCCCACTGTTTCCATCGGTGACTCCATCATTTTCAAGCACAAACAACACTACAGCCTCTACATTTTCAAGAACCAGAACGCCTTCAAACTCTGCAACTTCACTCAAGCCACTCTTCTCGCCAACCCCTACACGTGGCATCCATCTCGGCTTGGTTTCTTCTACTTTGCCTTCCACAATGGCACACTGAAAGCATGCCAAGAGTCTCAAAAGCTAGCCATAAAGGTTATTACTTCTTCAGCAATGGCTCCAGTAGCAACACCAGCACCTTCTTCTGGTGGAGAGGTGCCATCTTCACCTTCATTTGCATGGCCTTTTCGTCCAAGGCAAGGAGTTTCTTCACCTGGTCCAGCACCACAAGCACAAGCAAGTTCACCAGTGACAGTTCCATTGGTGCCAGATAAAGGTGGTGGCATGCCCTTCATTAACAGTAACCCTGCAGTGCCTCTTCCTACTGGTGAAGTTGACTCTGCTACCATACGCCCCTTACCCACCTCTGGTCATCAAGGACAGGTGATGATGATTGGGTCATTTGGATTTCATATTGCAGTGCAGACAGTGGCTTTACTGCTGCTAAAGCAATCGATTGCTGCATTTGCTTTTTTCCTTTTCCCCTTGCTTTTCATATTTTATGGGGTCCCTAAGATGACCACTGCATGTCATGAAAAATCACACATATGGGGGAGATCTGATGTCATGCCATACCAGTTTCTAAAGCATCGCTGA 1470 0.5238 MASSKLMPSSNSRKSEASPSPSPTPQFTTNNFMPIPDAAPKTVDDVWREIVAGDRRDCKEEAPDDEMMTLEDFLVKAGAVDDDDGTDHDADIKMPMPLGSGVFSFDPLPTTPFPDAAEGSVIGFGNGVEVVEGGRAKRARPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEDENDKLIKEKAERKKERYKQLMEKVLPIGQKQRPPCVLRRARSLQWLSHSATILVDGSSEWKNPTVSIGDSIIFKHKQHYSLYIFKNQNAFKLCNFTQATLLANPYTWHPSRLGFFYFAFHNGTLKACQESQKLAIKVITSSAMAPVATPAPSSGGEVPSSPSFAWPFRPRQGVSSPGPAPQAQASSPVTVPLVPDKGGGMPFINSNPAVPLPTGEVDSATIRPLPTSGHQGQVMMIGSFGFHIAVQTVALLLLKQSIAAFAFFLFPLLFIFYGVPKMTTACHEKSHIWGRSDVMPYQFLKHR 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02158 489 MobiDBLite consensus disorder prediction 1 35 - -
Cca02g02158 489 MobiDBLite consensus disorder prediction 358 377 - -
Cca02g02158 489 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 155 170 IPR004827 GO:0003700|GO:0006355
Cca02g02158 489 SUPERFAMILY Cupredoxins 236 325 IPR008972 -
Cca02g02158 489 CDD bZIP_plant_BZIP46 152 198 - -
Cca02g02158 489 Pfam bZIP transcription factor 150 209 IPR004827 GO:0003700|GO:0006355
Cca02g02158 489 PANTHER OS04G0422700 PROTEIN 230 439 - -
Cca02g02158 489 Gene3D - 150 205 - -
Cca02g02158 489 SUPERFAMILY Leucine zipper domain 152 203 IPR046347 GO:0003700|GO:0006355
Cca02g02158 489 SMART brlzneu 148 210 IPR004827 GO:0003700|GO:0006355
Cca02g02158 489 Coils Coil 171 202 - -
Cca02g02158 489 PANTHER OS04G0422700 PROTEIN 230 439 - -
Cca02g02158 489 MobiDBLite consensus disorder prediction 1 39 - -
Cca02g02158 489 Gene3D - 233 327 IPR008972 -
Cca02g02158 489 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 150 202 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02158 Cca-Chr2 41903045 41910804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02158 41 232 bZIP Transcription Factor Family AT5G44080 54.822 1.69e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca02g02158 bZIP_1 2.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02158 - - gmx:100808387 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00848 08 18846286 18858776 Cca02g02158 02 41903045 41910804 PCT