Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02155 ATGAAAAAAAAAGAGACGCAGATTGATAATATTGAAGAGAATGATGGCAACTGCAATACGAACCTTGCTATCACCAAGTGCACAGGCGAAACACAAGCAAATTTGGCTTCACTTATTACTCAATACGTTGAGTCTCTAAATCAGCGCAGATTCCGCCACTTGGGCTACCCCACTAATCAGGATTTAAACTATGACGTATTATTACCGTTGCTTAATTTTCATTTGAACAATGCCGGTGATCCATTTCTAGGGAGTAGTTTCTCCCTAAATTCAACAGCATTTGAAGTTTGCGTGCTTGATTGGTTTGCAAATCTGTGGGAGATAGAGAAGAATGAGTATTGGGGATACGTCACAACTGGTGGAACTGAAGGCAACCTTCACGGGATTTTAGTAGGGAGAGAACAACTTCCTGATGGGATATTATATACCTCTCAAGATTCGCATTATTCAATATTCAAAATAGCAAGAATGTATCGAATGCAGTGTGTGAAGGTTAGAACATTAGTCTCGGGTGAGATTGATTGTGTTGATCTAAAGGCTTTACTTGTTGCACACAAGGACAAACCAGCCATCATCAATTTAAACATAGGGACAACTATGAAAGGAGCTGTAGATGATGTTGAACTTGTAATACAAACGCTTGAGGGATGTGGTTTCACTCGCGACCGATTCTATGTTCACTGTGATGCAGCTCTTTTTGGAATGATGTTGCCTTTTCTCAAAGGAGATGTCTTCCGCCATGCCGAGCTGCACAAGTATTTTGATTGCTCAAAAATTCACACTTACATATCTAATAATGAAAGGATTCTGCATCTCAAACCCCGGCCTTCAATCGTCAAACCTAAATCTGCTGATCTTAGCCCCCAGTCTAAATCTAAAGAAACCACCATATCAACAAGACAAAAGTCCGGTGGCACGTCTGAAGAATGTGGAAAGCACTTACAAGATGAGCGTAATCGCTTCTGCTCCATTACATGCAAGATCTCAGTGCTTCCAGCGGAGACCCAAAACCAaggtcaaaatcaatgttcacaaaactggcatgtaaggagtctgggtgcggagcgcacagaggaaacggccgcgcggaggggtcgcgtgcaggctgggggtcttggtgcgctgggcggaggggtttga 1140 0.3649 MKKKETQIDNIEENDGNCNTNLAITKCTGETQANLASLITQYVESLNQRRFRHLGYPTNQDLNYDVLLPLLNFHLNNAGDPFLGSSFSLNSTAFEVCVLDWFANLWEIEKNEYWGYVTTGGTEGNLHGILVGREQLPDGILYTSQDSHYSIFKIARMYRMQCVKVRTLVSGEIDCVDLKALLVAHKDKPAIINLNIGTTMKGAVDDVELVIQTLEGCGFTRDRFYVHCDAALFGMMLPFLKGDVFRHAELHKYFDCSKIHTYISNNERILHLKPRPSIVKPKSADLSPQSKSKETTISTRQKSGGTSEECGKHLQDERNRFCSITCKISVLPAETQNQGQNQCSQNWHVRSLGAERTEETAARRGRVQAGGLGALGGGV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02155 379 MobiDBLite consensus disorder prediction 283 305 - -
Cca02g02155 379 PANTHER - 10 242 - -
Cca02g02155 379 MobiDBLite consensus disorder prediction 278 311 - -
Cca02g02155 379 Pfam Pyridoxal-dependent decarboxylase conserved domain 91 244 IPR002129 GO:0016830|GO:0019752|GO:0030170
Cca02g02155 379 PANTHER SERINE DECARBOXYLASE 10 242 - -
Cca02g02155 379 Pfam PLATZ transcription factor 243 328 IPR006734 -
Cca02g02155 379 SUPERFAMILY PLP-dependent transferases 40 256 IPR015424 -
Cca02g02155 379 Gene3D - 77 269 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02155 Cca-Chr2 41859648 41864116 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Cca02g02155 Pyridoxal_deC 4.6e-10 CL0061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02155 K25193 - gmx:100781665 405.216