Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02142 ATGATGGGTAGAGCTAGTGGCAGTACCACTTGCACTCCCTTCTGCtctttcttctttatttcttgcttactactttttgctgcttcctCTGATGCAAGGCCTTCAATTGTGGATGGACTCTCATGGAATTACTATTGGTTGACCTGTCCCAGGCTTGAAACCATAGTTCGAAGACATCTCCAGAAGGTCTTCATCCAGGACAAGGGTCAGGCTCCTGCCTTACTCAGGATCTTCTTCCATGACTGCTTCGTTCAGGGTTGCGATGGGTCGATATTGTTGGATGGAAGTCCAAATGAAAGGGACCAACCCGCAAACATAGGGATAAGACCAGAGGCATTGCAGACCATTGAAGACCTTCGATCTGTTGTTCACAAGCGGTGTGGAAGGGTTGTCTCTTGCGCTGACCTCGTTGTTCTAGCGGCACGCGAAGCTGTTTCTCAGGCAGGGGGGCCAAAATTCGACGTGCCACTGGGAAGAAAGGACGGCCTAACCTTTAGCATAAACGGCACAAACAACCTTCCGCCGCCGTTTTTCCGCACCGGCGAGCTCCTCGACACATTCGGACGCAGAAACTTCGACGCCAGCGACGTGGTGGCGCTCTCCGGCGCGCACACCTTCGGGCGAGCCCACTGCGGCACCTTCTTCGACCGAATCAACCAAACGGACCCTCCCATCGACCCCTCCTTCGCCGACAGCCTCAGCGACACGTGTCCCAGCGCGGATTCCGACAACACCGCGGTGCTGGACGTGAGAAGCCCGAACGTGTTCGACAACTTGTACTACGTTAACCTCATGAACCGCCAGGGTCTCTTTACCTCGGACCAGGACCTCTTTAGTGACTCCAGGACCACGGGAATTGTGAGGTCCTTCGCCACCAATCAGAAACTCTTCTTCGACAAGTTTTCCGATGCGATTGTGAAGTTGAGTCAGTTGGATGTGTTGACGGGAAAACAAGGGCAGGTTCGCGCCAAATGCTCCATTCCCAACAACAAGAAGCTCGTCACCTCTGTTGTAGTGGAAGACGGGGTGGATTTCACTGCTAAACTCTGA 1050 0.519 MMGRASGSTTCTPFCSFFFISCLLLFAASSDARPSIVDGLSWNYYWLTCPRLETIVRRHLQKVFIQDKGQAPALLRIFFHDCFVQGCDGSILLDGSPNERDQPANIGIRPEALQTIEDLRSVVHKRCGRVVSCADLVVLAAREAVSQAGGPKFDVPLGRKDGLTFSINGTNNLPPPFFRTGELLDTFGRRNFDASDVVALSGAHTFGRAHCGTFFDRINQTDPPIDPSFADSLSDTCPSADSDNTAVLDVRSPNVFDNLYYVNLMNRQGLFTSDQDLFSDSRTTGIVRSFATNQKLFFDKFSDAIVKLSQLDVLTGKQGQVRAKCSIPNNKKLVTSVVVEDGVDFTAKL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02142 349 Gene3D - 43 326 - -
Cca02g02142 349 ProSiteProfiles Plant heme peroxidase family profile. 39 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 Gene3D Peroxidase, domain 2 175 309 - -
Cca02g02142 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Cca02g02142 349 SUPERFAMILY Heme-dependent peroxidases 35 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 CDD secretory_peroxidase 39 326 IPR033905 GO:0004601|GO:0042744
Cca02g02142 349 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Cca02g02142 349 Pfam Peroxidase 56 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PANTHER PEROXIDASE 25-RELATED 25 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02142 349 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Cca02g02142 349 PANTHER PEROXIDASE 25 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02142 Cca-Chr2 41651365 41653406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02142 36 344 Peroxidase AT1G71695 54.430 2.32e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02142 K00430 - gmx:100804126 522.702