Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02141 ATGATCATGGCTTCTATTATTTTTGGTAGGAGTGCTTTCCTCACCTTTCTTCTCATCTGTACCTTTCTTTCTGTTTCCACCATTAAAGTGTGTGAGGCACAAGCCAAGCCTCCTACAGCGAAGGGGCTATCATATACCTTCTATGATAAAAGCTGTCCTAAGCTTGAATCTATCATCAGAAAAGAACTCAAAAAGATCTTCAAGAATGACATTGGTCAAGCTGCTGGCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTTCAGGGTTGCGATGGGTCAGTTTTATTGGATGGATCAGCAAGTGGGCCAAGTGAGAAAGATGCACCACCCAACTTGACTTTGAGAGCTGAGGCCTTTAAAATCATCGAGGACCTTCGTAGTCTTCTGGAGAAGAGCTGTGGAAGAGTCGTCTCCTGTTCCGACATCACTGCCCTCGCCGCGCGTGATGCTGTTTTCCTCTCAGGAGGACCAGAGTACGAGATTCCATTGGGAAGAAGAGATGGATTAACCTTTGCCACAAGAAACGATACACTGGCGAATCTTCCACCACCCTCAAGCAACGCCACTACGATCCTAGACTCGTTGGCTACAAAAAACCTAGACCCCACCGACGTGGTAGCCCTCTCAGGTGGGCACACCATAGGCATCAGCCACTGCAACTCCTTCTCCGACAGGCTATTCCCCACCCAGGACCCAGTTATGGACAAAACATTCGGGAAAAACCTAAGACTCACGTGCCCCACCAACACCACCGTCAACACCACTGTCTTGGACATTCGATCCCCCAACACCTTCGACAACAAGTACTACGTTGACCTCATGAACCGCCAGGGCCTCTTCAACTCCGACCAAGACTTGTACACTGATAAGAGGACCAAAGGCATTGTCACAAGCTTTGCCGTCAACCAGAGTCTGTTCTATGAGAAGTTTGTGTTTGCTATGCTCAAGATGGGTCAGCTTAGCGTGTTGACGGGAACACAAGGGGAGATTCGTGCCAATTGCTCCGTTAGGAACACCGATACCAAGTCCTTCTTGACCACTATCGTGGGTGATGTCGTGGAACAGATAATAGAAATGTAA 1080 0.4843 MIMASIIFGRSAFLTFLLICTFLSVSTIKVCEAQAKPPTAKGLSYTFYDKSCPKLESIIRKELKKIFKNDIGQAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEKDAPPNLTLRAEAFKIIEDLRSLLEKSCGRVVSCSDITALAARDAVFLSGGPEYEIPLGRRDGLTFATRNDTLANLPPPSSNATTILDSLATKNLDPTDVVALSGGHTIGISHCNSFSDRLFPTQDPVMDKTFGKNLRLTCPTNTTVNTTVLDIRSPNTFDNKYYVDLMNRQGLFNSDQDLYTDKRTKGIVTSFAVNQSLFYEKFVFAMLKMGQLSVLTGTQGEIRANCSVRNTDTKSFLTTIVGDVVEQIIEM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02141 359 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PANTHER PEROXIDASE 31 343 - -
Cca02g02141 359 Pfam Peroxidase 60 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 ProSiteProfiles Plant heme peroxidase family profile. 42 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 Gene3D Peroxidase, domain 2 183 318 - -
Cca02g02141 359 PANTHER PEROXIDASE 25-RELATED 31 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Cca02g02141 359 Gene3D - 46 335 - -
Cca02g02141 359 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Cca02g02141 359 CDD secretory_peroxidase 42 336 IPR033905 GO:0004601|GO:0042744
Cca02g02141 359 SUPERFAMILY Heme-dependent peroxidases 38 339 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02141 359 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02141 Cca-Chr2 41644669 41646722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02141 14 359 Peroxidase AT1G71695 60.969 1.63e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02141 K00430 - gmx:100775837 587.415