Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02139 ATGGGCTGTGTTCAGGCCAAGCCATTGGATTTCGAAGCTTCGGAGTACAGGGGCCTAGAGAGGCTGAAGTTGGACAATGGGTATGTGCCAAGTACCGATTTTGTTGCTCATAGAAGATCCACTGGTCAAAGACTTGCGCCTAATAAGGAGTACGATAGGTTGCATCATCAGAGAGaacaacaacaacaacaacaacCCAGAAGGGAAAGTAAAGTTGAGTCGAAGGGTAAGTTGGTTGGTAGAGAGGGGAGGAGAGTCGCACGTGATGATAACAAGTTGCCAAACAAGTGTTGTTTTGAGGATGAGATGGTTGATGGCTGGCCAAGGTGGTTGGTTGATAATGTTCCTAAACATGTCTTTGCTGGCTTGGTTCCCAAAAGTGCTGAAGCCTTCAAGATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTGGATCGAGACACTGGGGAAATTGTGGCCCTGAAGAAGGTTCGCTTCAATACATCAGAGCCTGAAAGCATTAAGTTTATGGCAAGAGAAATTATGATATTACAGAGACTGGATCATCCCAATGTAGTAAAACTTAAAGGATTAGCCACTTCAAGAATGCAGTACAGTATATATCTTGTTTTTGACTTCATGCAAACAGATTTGGCAAGAATTATCGCTCATTCTGAAGAGAGACTAACTGAACCGCAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGATAGGGGAATTCTGCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATAAAAATGGGATGCTTAAGATTGCAGATTTTGGGCTTGCCAATTTTTATGGTCCAGACTGTCACCAACCTCTCACAAACCGGGTTGTGACACTATGGTACCGAGCTCCTGAGTTGTTGTTAGGTGACACAAATTATGGAGTTGGTATTGATCTATGGAGTGCTGGATGTCTTTTGGCAGAAATGTTTAAAGGAGTTCCAATCATGCCTGGCAGAACTGAGGTTGAGCAAATTCATAAAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGGAAATTTAAACTTTCTACAACTTTTAGACCTCCGAAGTCTTATAGACCTAGCCTTGTTGAAACTTTCAGGGATCTCCCTCCATCTTCCTTGGGTCTTTTATGCACTTTGCTTGCTTTGGATCCTGTATTCCGTGGTAGTGCATCTAAAGCTCTAAACAATCAGTTTTTCTTTACAAGCCCATTGGCATGTGACCTCTCTGGTCTGCCTGCAGTCTTCAGAGAGGATGAGGAGCCTGTTCAAGATAATGAACAGATCAAGTACATGAACTCCAAAATCAGGCGTTCTCGCACATATCTTGAGCGTCGCAAGAATTCAGTATCTAAGAGGCCAATAGAGCATACTGTATCTTCTAAAGAGGAATTGATAAGGAATGCTAATCCTGAAACTTATGCTCCAACTGAAGACATGGATAGCACAAGTAGTACATCATCTAGTGTAAACCCTGGTGGGGCTAAGGACCAATCACCTTTATTTCCATCTCCATTTCAGGCTTCAGATCAAAGGCTGTCTCCCAAAACCCATCACCATGTTGGTGAAAGAAACATCAAGAACCTTCCTCCATTACTCAAGTCAAAACCAAATGCTACCAAGAAAGATGACAGCAGATACAGACCAGGCCATGTTTTCAGGTCAGCTTCCACCAGAGAATTTAGATACTCAAAAAGGGAGGAACGTTTACTCTTGGACATTGATGATTAG 1770 0.422 MGCVQAKPLDFEASEYRGLERLKLDNGYVPSTDFVAHRRSTGQRLAPNKEYDRLHHQREQQQQQQPRRESKVESKGKLVGREGRRVARDDNKLPNKCCFEDEMVDGWPRWLVDNVPKHVFAGLVPKSAEAFKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREIMILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMQTDLARIIAHSEERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLANFYGPDCHQPLTNRVVTLWYRAPELLLGDTNYGVGIDLWSAGCLLAEMFKGVPIMPGRTEVEQIHKIFRLCGTPSEEYWRKFKLSTTFRPPKSYRPSLVETFRDLPPSSLGLLCTLLALDPVFRGSASKALNNQFFFTSPLACDLSGLPAVFREDEEPVQDNEQIKYMNSKIRRSRTYLERRKNSVSKRPIEHTVSSKEELIRNANPETYAPTEDMDSTSSTSSSVNPGGAKDQSPLFPSPFQASDQRLSPKTHHHVGERNIKNLPPLLKSKPNATKKDDSRYRPGHVFRSASTREFRYSKREERLLLDIDD 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02139 589 MobiDBLite consensus disorder prediction 38 85 - -
Cca02g02139 589 MobiDBLite consensus disorder prediction 453 476 - -
Cca02g02139 589 MobiDBLite consensus disorder prediction 550 565 - -
Cca02g02139 589 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Cca02g02139 589 PANTHER CELL DIVISION PROTEIN KINASE 1 551 - -
Cca02g02139 589 PANTHER CYCLIN-DEPENDENT KINASE 1 551 - -
Cca02g02139 589 MobiDBLite consensus disorder prediction 453 565 - -
Cca02g02139 589 Pfam Protein kinase domain 132 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02139 589 SMART serkin_6 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02139 589 ProSiteProfiles Protein kinase domain profile. 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02139 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Cca02g02139 589 MobiDBLite consensus disorder prediction 43 85 - -
Cca02g02139 589 Gene3D Transferase(Phosphotransferase) domain 1 214 449 - -
Cca02g02139 589 SUPERFAMILY Protein kinase-like (PK-like) 127 417 IPR011009 -
Cca02g02139 589 MobiDBLite consensus disorder prediction 488 508 - -
Cca02g02139 589 Gene3D Phosphorylase Kinase; domain 1 121 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02139 Cca-Chr2 41628658 41633225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02139 126 427 Core Cell Cycle Gene Families AT5G10270 46.875 6.33e-91 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Cca02g02139 Pkinase 4.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02139 K08819 - gmx:100776854 972.23