Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02122 ATGGAAAATATTGCTCCCTATAGTTTTACCACTTTGTTATTTTCCTTGCTATTCTTCTGCCTCTCCCTGACAAAGATAGGAGTCACTTGTCTCTCACCTGATGGACAAGCCCTTCTTGCTCTTCTATCTGCAGCAGGTCCTGCTGCAAAATCATCACCTTCTGTTCTCTCCTCATGGAATCCATCAAGCTCAACACCTTGTTCATGGAAAGGCATCACTTGCTCCCCACAAAGTAGAGTCATTTCCCTCTCTATTCCAGATACTTTTCTAAACCTCTCCTATTTACCTCCTCAGCTCTCCTCTTTATCAATGTTGCAACTTCTCAATCTCTCTTCCACCAATGTCTCTGGCTCCATTCCACCCTCTTTTGGTCAACTCACCCATCTTCAGCTGCTGGACCTCTCCTCAAACTCTCTCACTGGTTCCATACCTGCTGAGCTTGGAAGACTCTCCTCACTTCAATTCCTCTTCTTGAACTCCAACAGAATGACAGGAAGCATTCCTCAACATCTTGCTAATCTTACTTCACTTGAAGTTCTCTGCCTCCAAGACAATCTTCTTAATGGCTCAATCCCATCACAGTTAGGCTCTTTGACTTCTCTGCAGCAGTTTAGGATAGGGGGCAATCCATACCTCACTGGACAAATCCCATCACAGTTGGGACTACTCTCCAACCTCACCACTTTTGGTGCAGCTTCCACTGGACTTTCTGGTGCCATTCCCTCTACATTTGGTAACTTGATCAATCTACAAACTCTAGCACTTTATGATACTGAAATTTCCGGCTCAATACCACCAGAACTTGGGTTGTGTTCTGAGCTGAGAAATCTGTATCTACACATGAATAAGCTCACTGGCTCTATCCCTCCTCAATTGAGCAAGTTGCAAAAACTTACTAGCTTGCTACTTTGGGGCAATGCCATAACCGGTCCAATCCCAGCAGAGCTTTCCAACTGTTCATCACTTGTTATATTTGATGTCTCTTCTAATGATCTCTCTGGTGAAATACCTGGGGATTTTGGGAAGCTGGTGGTTCTGGAACAGCTTCATCTATCAGACAATTCACTCACAGGTAAAATACCATGGCAGTTAAGCAACTGCACCAGCCTTTCCACTGTTCAGCTTGACAAGAATCAGTTATCAGGTACAATTCCATGGGATTTAGGCAAATTGAAGGTTCTGCAGAGTTTTTTCCTTTGGGGTAATTTAGTGTCTGGAACCATTCCATCCTCTTTTGGAAACTGCACAGAACTCTATGCACTTGACCTTTCAAGGAACAAGCTGACAGGTTCGATCCCAGAAGAGATTTTCAGCTTGAAGAAGCTGAGTAAGCTTCTGCTTCTGGGAAATTCATTAACAGGAAGGTTGCCACCAAGTGTTGCTAATTGCCAGTCTTTAGTGAGGCTGAGGGTTGGAGAGAACCACCTTTCAGGACAGATTCCTAAAGAGATAGGCCAATTGCAGAATCTTGTGTTCCTTGACTTGTACATGAATCACTTCTCTGGAAGCATACCAGTGGAGATTGCCAATATCACAGTTCTTGAACTGTTAGATGTGCACAACAACTACCTCACTGGGGAAATTCCATATGTGATTGGGGAGCTTGAAAATTTGGAGCAGCTTGATCTCAGTAGAAACAGTTTGACAGGTGAAATTCCTTGGAGCTTTGGAAACTTAAGCTATTTGAACAAGCTCATCCTCAATAACAACTTACTGACAGGATCAATCCCAAAATCCATTAGAAATTTGCAGAAGCTAACTCTACTGGATTTGAGTTACAACAACCTCTCTAGTCGCATACCCCCTGAGATTGGTCTTGTTACAAGCTTAACCATCAGTTTGGACTTGAGCTCAAATGCGTTTACAGGAGAAATCCCGGACTCAGTGTCTGCTTTGACACAGTTGCAATCACTTGATCTTTCTCATAATATGCTTTATGGAGGAATTAAGGTTCTGGGGTCTCTCACTAGCCTCACTTATCTCAATATCTCCTACAACAACTTCTCAGGTCCTATCCCAGTAACTCCATTCTTCAGAACTGTATCTTCTAATTCATATCTTCAGAATTCCCATCTTTGTCAGTCCATTGATGGAACAACATGTTCTTCAAGTCTGATACGAAAAAATGGTTTAAAATCTGCAAAAACCATCGCTGTGATCGCAGTCATTCTAGCCTCGGTTACTATAATTATCATTTCATCCTGGATTCTAGTAACTCGTAAGCATGGATACACGGCTGAAAAAACTTTGGGGACTTCAGGTTCCACATCAGGAGCTGAAGACTTCTCTTATCCTTGGACTTTCATCCCATTTCAGAAAGTAAACTTCGGCATAGATAATATCTTGGATTGCTTGAAGGATGAAAATGTGATTGGAAAGGGTTGCTCAGGTGTTGTGTACAAGGCTGAGATGCCAAATGGGGAGTTGATAGCAGTGAAGAAGCTTTGGAAAGCAAGCAAAGCAGATGAAATTGTGGATTCTTTTGCTGCAGAGATTCAGATTCTCGGGTACATTCGGCATAGGAACATTGTGAGGCTCCTAGGTTATTGTTCTAACAGGAGCACTAATCTTCTTCTCTATAACTACATCCCAAATGGTAATCTGCGACAGCTTTTACAAGGGAACAGGAACTTAGACTGGGAAACAAGATACAAGATTGCCGTTGGATCTGCTCAAGGTCTAGCTTACCTTCATCATGATTGTGTCCCTGCAATCCTCCATAGAGATGTCAAGTGCAATAACATACTCCTAGACTCCAAATTTGAGGCATATCTGGCAGATTTTGGTCTTGCAAAGCTAATGCATTCACCAAATTATCATCATGCAATGTCCAGAGTTGCTGGTTCATATGGTTATATTGCCCCAGAATATGGTTACTCCATGAACATAACAGAGAAGAGTGATGTCTATAGTTATGGGGTGGTTTTACTAGAGATACTAAGTGGGCGTAGTGCTGTTGAATCCCATGTTGGAGATGGCCAACACATAGTGGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCTGTATCAATACTAGACACAAAGCTCCAAGGTCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACGCTTGGAATTGCTATGTTTTGTGTGAACTCTTCGCCATCAGAACGCCCTACAATGAAGGAAGTGGTTGCTCTACTAATGGAGGTGAAGAGCCAACCTGAGGAGATGGGAAAGACTTCTCAACCTCTAATAAAACAGTCCTCAAATCAAAGCTGA 3249 0.4269 MENIAPYSFTTLLFSLLFFCLSLTKIGVTCLSPDGQALLALLSAAGPAAKSSPSVLSSWNPSSSTPCSWKGITCSPQSRVISLSIPDTFLNLSYLPPQLSSLSMLQLLNLSSTNVSGSIPPSFGQLTHLQLLDLSSNSLTGSIPAELGRLSSLQFLFLNSNRMTGSIPQHLANLTSLEVLCLQDNLLNGSIPSQLGSLTSLQQFRIGGNPYLTGQIPSQLGLLSNLTTFGAASTGLSGAIPSTFGNLINLQTLALYDTEISGSIPPELGLCSELRNLYLHMNKLTGSIPPQLSKLQKLTSLLLWGNAITGPIPAELSNCSSLVIFDVSSNDLSGEIPGDFGKLVVLEQLHLSDNSLTGKIPWQLSNCTSLSTVQLDKNQLSGTIPWDLGKLKVLQSFFLWGNLVSGTIPSSFGNCTELYALDLSRNKLTGSIPEEIFSLKKLSKLLLLGNSLTGRLPPSVANCQSLVRLRVGENHLSGQIPKEIGQLQNLVFLDLYMNHFSGSIPVEIANITVLELLDVHNNYLTGEIPYVIGELENLEQLDLSRNSLTGEIPWSFGNLSYLNKLILNNNLLTGSIPKSIRNLQKLTLLDLSYNNLSSRIPPEIGLVTSLTISLDLSSNAFTGEIPDSVSALTQLQSLDLSHNMLYGGIKVLGSLTSLTYLNISYNNFSGPIPVTPFFRTVSSNSYLQNSHLCQSIDGTTCSSSLIRKNGLKSAKTIAVIAVILASVTIIIISSWILVTRKHGYTAEKTLGTSGSTSGAEDFSYPWTFIPFQKVNFGIDNILDCLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKASKADEIVDSFAAEIQILGYIRHRNIVRLLGYCSNRSTNLLLYNYIPNGNLRQLLQGNRNLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMHSPNYHHAMSRVAGSYGYIAPEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGQHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPSERPTMKEVVALLMEVKSQPEEMGKTSQPLIKQSSNQS 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02122 1082 Pfam Protein kinase domain 787 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02122 1082 Gene3D Ribonuclease Inhibitor 33 190 IPR032675 -
Cca02g02122 1082 Gene3D Ribonuclease Inhibitor 577 703 IPR032675 -
Cca02g02122 1082 MobiDBLite consensus disorder prediction 1062 1082 - -
Cca02g02122 1082 SMART LRR_typ_2 583 607 IPR003591 -
Cca02g02122 1082 SMART LRR_typ_2 343 367 IPR003591 -
Cca02g02122 1082 SMART LRR_typ_2 415 439 IPR003591 -
Cca02g02122 1082 SMART LRR_typ_2 247 271 IPR003591 -
Cca02g02122 1082 SMART LRR_typ_2 174 198 IPR003591 -
Cca02g02122 1082 SMART LRR_typ_2 295 319 IPR003591 -
Cca02g02122 1082 SMART LRR_typ_2 632 659 IPR003591 -
Cca02g02122 1082 SMART LRR_typ_2 535 558 IPR003591 -
Cca02g02122 1082 SMART LRR_typ_2 126 150 IPR003591 -
Cca02g02122 1082 Gene3D Ribonuclease Inhibitor 481 576 IPR032675 -
Cca02g02122 1082 Pfam Leucine Rich Repeat 346 367 IPR001611 GO:0005515
Cca02g02122 1082 SUPERFAMILY Protein kinase-like (PK-like) 774 1057 IPR011009 -
Cca02g02122 1082 ProSitePatterns Protein kinases ATP-binding region signature. 791 814 IPR017441 GO:0005524
Cca02g02122 1082 Gene3D Ribonuclease Inhibitor 287 382 IPR032675 -
Cca02g02122 1082 Gene3D Ribonuclease Inhibitor 191 286 IPR032675 -
Cca02g02122 1082 Gene3D Ribonuclease Inhibitor 383 480 IPR032675 -
Cca02g02122 1082 ProSiteProfiles Protein kinase domain profile. 785 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02122 1082 Gene3D Transferase(Phosphotransferase) domain 1 863 1079 - -
Cca02g02122 1082 PANTHER - 12 1078 - -
Cca02g02122 1082 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Cca02g02122 1082 MobiDBLite consensus disorder prediction 1065 1082 - -
Cca02g02122 1082 SMART serkin_6 785 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02122 1082 Pfam Leucine rich repeat 105 162 IPR001611 GO:0005515
Cca02g02122 1082 Pfam Leucine rich repeat 394 452 IPR001611 GO:0005515
Cca02g02122 1082 Pfam Leucine rich repeat 537 596 IPR001611 GO:0005515
Cca02g02122 1082 PRINTS Leucine-rich repeat signature 129 142 - -
Cca02g02122 1082 PRINTS Leucine-rich repeat signature 632 645 - -
Cca02g02122 1082 SUPERFAMILY L domain-like 382 696 - -
Cca02g02122 1082 ProSitePatterns Serine/Threonine protein kinases active-site signature. 905 917 IPR008271 GO:0004672|GO:0006468
Cca02g02122 1082 SUPERFAMILY L domain-like 55 405 - -
Cca02g02122 1082 PANTHER UNNAMED PRODUCT 12 1078 - -
Cca02g02122 1082 Gene3D Phosphorylase Kinase; domain 1 770 862 - -
Cca02g02122 1082 ProSiteProfiles Leucine-rich repeat profile. 585 607 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02122 Cca-Chr2 41418444 41422692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02122 28 1076 Receptor kinase-like Gene Family AT5G56040 44.434 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Cca02g02122 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02122 - - ccaj:109812175 1999.17