Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02106 atgatcatggacatggacatggacatggAGCTTCACATCTTGCTTTTACTCCTGACACTTATAGTGCTCATCACCCGCTTCATTCTGAACCGCCACGCTAGGAAAAACCAACCCCCCGGTCCAACCGGCCTCCCCATAATCGGAAACCTCCACCAACTGGGCCCCAAACCCCACTGCACGCTCTCCTCGCTGGCCCAAACCCACGGCCCAATCATGTCTCTGCGTCTGGGCTCCGTCACCACGGTGGTGGCCTCCTCCCCGGGGACGGCCCAAGAGATCCTCCAAAAGAACGACCAAGCCTTCGCGAGGCGGCTCATCCCGGAATCCGTGGCGGCCCAGCCCAACGTGGGCGACACCCTGGCGTGGGCCCCCGCGGACCCAAGGTGGCGGCACCGGCGGCGCGTCTGCACCACAGAGATCTTCACGGCCCAACGGCTGGACCTGCTGCAGCACCTGCGGCAGCGCAAAGTGCAGGAAATGGTGGAGCACCTCCGGAAGCAAGCTTTGAGCGGAAACGTGGTTGACATAGGTGAAGTGGCGTTCGCGACGATGCTGAATCTTGTTTCGAACACGGTGTTCTCGGAGGACTTGGTGGACCCGGAGTTCGAGAGTGCCGGCGAGTTCAAGGAGGTTGTGAGGAGGATCATGGAGGACGCCGGCAGGGTTAACATCTCCGACTACTTTCCGTTGCTCAAGAGGTTTGACTTGCAGGGCGTGAAGCGACACGTGGCGGTTTCTTACGCCAGGTTGCATCACATTTTCGACCTCATCATAAGGAAACGTGTCGGGGAAAGGGAGAGAGAGCCTTCCGGTCCCGCAAAGGGGGATTTCTTGGATGTCTTGCTTGATCATTGTCACCAAGGGGACCCCTCCCATTTCACCCTCCAAACCATCAAGCCTTTGATTCTCGATTTGTTCATTGCGGGAAGTGACACTTCGGGATCAACATCAGAATGGGCAATGGCAGAGCTTCTACGCAACCCAAAAGTGATGCAGAAGGCAAGAGAGGAGCTGATCCAAGTGATAGGGAGCTCCAAGGAAGTAAAAGAATCGGACATTCCAAGGCTTCCATACATCCAAGCAATTGTAAAAGAAACCCTTCGCCTCCATCCATCGGCTCCCCTTCTCTTGCCCTACGTTGCAGGAGAAGATGTTGAAGTGAGTGGCTACACCATTCACAAAGGGAACCAAGTCCTCATCAATGCATGGTCTATTGGGAGGAACCCCCAGTTTTGGGAGGATCCCTTGTTGTTTGAGCCTGAAAGGTTTCTTAGGTCAAACGTGGATTTCAAGGGCAGGGATTTCGAGTATTTACCTTTTGGTGCAGGTAGGAGAATTTGCCCTGGCTTGCCACTTGCTAATAGGATGATTACTTTGATGTTGGCTGCGTTACTGCACTCTTTTCAGTGGAAGCTTCCTCCGGGTGTCACTCCTCAAACGCTTGACATGACTGAGCAGTATGGAATCACGTTGAAGAAACTCACTCCTCTTTCTGCTATTCCAATTTCACTGTGA 1515 0.5333 MIMDMDMDMELHILLLLLTLIVLITRFILNRHARKNQPPGPTGLPIIGNLHQLGPKPHCTLSSLAQTHGPIMSLRLGSVTTVVASSPGTAQEILQKNDQAFARRLIPESVAAQPNVGDTLAWAPADPRWRHRRRVCTTEIFTAQRLDLLQHLRQRKVQEMVEHLRKQALSGNVVDIGEVAFATMLNLVSNTVFSEDLVDPEFESAGEFKEVVRRIMEDAGRVNISDYFPLLKRFDLQGVKRHVAVSYARLHHIFDLIIRKRVGEREREPSGPAKGDFLDVLLDHCHQGDPSHFTLQTIKPLILDLFIAGSDTSGSTSEWAMAELLRNPKVMQKAREELIQVIGSSKEVKESDIPRLPYIQAIVKETLRLHPSAPLLLPYVAGEDVEVSGYTIHKGNQVLINAWSIGRNPQFWEDPLLFEPERFLRSNVDFKGRDFEYLPFGAGRRICPGLPLANRMITLMLAALLHSFQWKLPPGVTPQTLDMTEQYGITLKKLTPLSAIPISL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02106 504 SUPERFAMILY Cytochrome P450 38 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Cca02g02106 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 502 - -
Cca02g02106 504 Gene3D Cytochrome P450 24 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02106 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 502 - -
Cca02g02106 504 Pfam Cytochrome P450 38 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02106 Cca-Chr2 41257791 41259919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02106 3 502 Cytochrome P450 AT2G45550 43.676 7.32e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02106 - - vra:106769993 805.053