Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02105 ATGGGGTTACCTTCCACATCACTAGACACTAGCTGGTGCCTGTTTGCACTTCCAGCCATAGCAGGATCACAAAACTTACTTCACAACCCGCTCTTAGTCATCCTAATTGCACTTCTTTCCATTGGGCTTCTAGCATGGGCCTTCCCAAGAGGAGGAGGAGGTGTAGCATGGAAAAACGGAAGAAACCAAATGGGCCAGCTCGCTATTCCAGGGCCCAAAGGAGTCCCAATCTTTGGCCTCTTGTTTAGCCTAAGCCTAAGCCATGGGCTACCTCACCGCACCCTCGCTTCCATGGCTTCATCTCTAACGGCAACAAAACTCATGGCCTTCAGTTTGGGCTCAACCCCCGCAGTCATAACCTCAGATGCTGACGTGGCGCGTGAAATCTTGAACTCACCCCACTTCGCCGACCGTCCCGTTAAACAATCCGCTAAGAGGCTCATGTTCGACCGCGCCATTGGGTTCGCACCCAACGCACCGTATTGGCGTCTGCTGCGGAGGCTTGCCTCCACCCACCTCTTCTCCCCGCGGCGCATCCTAGCCCACGAGCCCCGTCGCCTGCTCCACTGCGCCGCCATGCTGCGTGACGTGGCTCACGAACAGTCCAAACACGGCTTCGTGCGCCTCAGGAAACACCTTCAAGACGCGGCTCTTAACAACATTATGGACACCGTTTTTGGAAGAAGGTATAAACGAGACGAATGCCGTAATGAGTTGGAAGAGGTGCGAGAGATGGTGAGGGAAGGGTTTGAGATTTTGGGGGCTTTCAACTGGTCCGATTATGTTCCTTGGATGAGCTTGTTTTATGACCCTTTACGTATTCGAGAACGGTGCTCGGTTCTTGCGCCTAGGGTTAAGGAATTTGTGAAGCGGGTTTTGGAGGAGCACCGAGTGGCTCCGTTCAAGGAACTTTCTGATGACTCGGATTTTGTGGATGTTCTGCTCTCTCTAGAGGGGGATGACAAGCTCCAAGATGATGATATCATTGCCGTTTTATGGGAAATGATATTCCGTGGCACGGATACAACTGCACTTCTTACCGAGTGGGTAATGGCGGAGCTTGTTTTGAACCAACAAGTTCAGACTAAGCTTCGCGATGAACTAGACAAGGTCGTGGGAAACAAAAGAGAAGTTACAAACTCCGATGTGATAAAACTTGCATACCTGGAAGCCGTTGTGAAGGAGACATTGCGAGTGCATCCAATTGGGCCCCTCCTTTCTTGGGCCCGTTTGTCCACGTCAGATATCCAGCTCAGCAACGGGATGGTGGTCCCAGGCAACACCACCACAATGGTGAACATGTGGGCCATAACCCACGACCCCAACGTGTGGCACGAGCCACTAGTGTTCAGGCCCGAGAGGTTCGTGAAGAGTGAAGGAGGGGTTGAAGTGGATGTTAGAGGTGTTGACCTTAGGCTGGCACCATTTGGAGCTGGACGTAGGGTTTGCCCAGGGAGGAACCTAGGCCTTGTGACTGTGAGCCTTTGGGTGGCTAACTTGGTTCACCACTTTCACTGGTTCCAAGACACGGCTAATCCACTTGACCTAACCGAGGTTCTCAAGCTATCTTGTGAGATGAAGAACCCTCTCAAAGCTGTGGCTTTTCCTAGGTTTACTTAA 1620 0.521 MGLPSTSLDTSWCLFALPAIAGSQNLLHNPLLVILIALLSIGLLAWAFPRGGGGVAWKNGRNQMGQLAIPGPKGVPIFGLLFSLSLSHGLPHRTLASMASSLTATKLMAFSLGSTPAVITSDADVAREILNSPHFADRPVKQSAKRLMFDRAIGFAPNAPYWRLLRRLASTHLFSPRRILAHEPRRLLHCAAMLRDVAHEQSKHGFVRLRKHLQDAALNNIMDTVFGRRYKRDECRNELEEVREMVREGFEILGAFNWSDYVPWMSLFYDPLRIRERCSVLAPRVKEFVKRVLEEHRVAPFKELSDDSDFVDVLLSLEGDDKLQDDDIIAVLWEMIFRGTDTTALLTEWVMAELVLNQQVQTKLRDELDKVVGNKREVTNSDVIKLAYLEAVVKETLRVHPIGPLLSWARLSTSDIQLSNGMVVPGNTTTMVNMWAITHDPNVWHEPLVFRPERFVKSEGGVEVDVRGVDLRLAPFGAGRRVCPGRNLGLVTVSLWVANLVHHFHWFQDTANPLDLTEVLKLSCEMKNPLKAVAFPRFT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02105 539 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 SUPERFAMILY Cytochrome P450 69 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 Gene3D Cytochrome P450 61 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 1 537 - -
Cca02g02105 539 Pfam Cytochrome P450 70 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g02105 539 PANTHER CYTOCHROME P450 78A7-RELATED 1 537 - -
Cca02g02105 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02105 Cca-Chr2 41249493 41251257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02105 7 538 Cytochrome P450 AT5G09970 63.925 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02105 K20619 - pvy:116124806 728.013