Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02086 ATGGAGCCTCTCTCTTCCACCAAACACAACAACAACAACCCCGCCAAGCCTTCCTCCCTCCACATGGAGGCACCGGCGGCGGAGGCCAGTCCCCTCCGTAAGATAATGGTGGTGGCGTCCATCGCCGCCGGGGTGCAATTCGGGTGGGCCCTCCAGCTCTCCCTGCTCACCCCCTACGTCCAGCTCCTGGGAATCCCCCACACATGGGCCGCCTTCATCTGGCTCTGCGGCCCAATCTCCGGGATGCTGGTCCAGCCCATAGTCGGCTACCACAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGCCGCCCCTTCATcgcggccggagccttcgccgtggccgtggccgtCTTCCTGATCGGCTACGCGGCGGACCTCGGGCACATGTTCGGCGACAACCTGGCGAAGAAAACCCGGCCCCGCGCAATCGCCATCTTCGTGGTGGGGTTCTGGATCCTTGACGTGGCCAACAACATGCTCCAGGGCCCCTGCCGCGCCCTCCTGGCGGACCTCTCGGCCGGCAACCACCGGAAGACGCGGTCCGCGAACGCCTTCTTCTCGTTCTTCATGGCGGTGGGGAACGTGCTGGGGTACGCGGCGGGGTCCTACAGCGGCCTCCACCACGTGTTCCCCTTCACGAAAACGAAAGCCTGCGACGTGTACTGCGCCAACCTGAAAAGCTGCTTCTTCCTCTCCATCGCGCTCCTCCTGACGCTGGCCACCGTGGCACTGAGCTACGTGAAGGAGAATCAGCTTGGGTCGGACAAAGGCAGCAACGGTGCGAGCGAGGAGGAGGGGTCAGGGTCGCACGGGGGCATGCCCTGCTTCGGGCAGTTATTCGGTGCGTTTCGCGAACTGAAACGGCCCATGTGGATCCTCCTCTTGGTGACGTGTCTCAACTGGATTGCGTGGTTCCCATTCTTGCTATTCGACACCGACTGGATGGGCCGCGAGGTCTACGGAGGAACCGTTGGGGAGGGCAAGGCCTACGATAGGGGCGTGCGCGCGGGTGCCTTGGGCCTCATGTTGAACTCCGTCGTCCTCGGTGCCACCTCCTTGGGAGTTGAAGTCTTGGCGCGTGGAGTTGGCGGCGTTAAGAGGTTGTGGGGGATTGTTAACTTCTTGCTCGCCATTTGCTTGGCCATGACCGTTTTGGTTACCAAGTTGGCTCAGCACAACCGCCAATACACCCTCCTCCCCAACGCCCACCATGAGCCTCTGCCTCCTCCCGCCGGCGTCAAAGCCGGCGCGTTAGCTCTCTTTTCCGTCCTCGGCATCCCTCTCGCGATTACTTACAGCATACCCTTCGCTCTGGCATCCATATTCTCCAGTACCTCAGGGGCAGGCCAAGGATTGTCTCTGGGAGTCCTCAACCTTGCAATTGTCATACCACAGATGGTGGTGTCTGTGACAAGTGGACCATGGGATGCTCTATTTGGCGGTGGTAACTTGCCGGCGTTCGTGGTGGGTGCAGTGGCGGCTGCAGCCAGTGGCATTTTATCCATAATCCTGCTGCCATCTCCACCGCCGGATTTGGCCAAAGCTGCAACCGCAGCCGGAGGAGGGTTCCATTAA 1575 0.6025 MEPLSSTKHNNNNPAKPSSLHMEAPAAEASPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGAFAVAVAVFLIGYAADLGHMFGDNLAKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGNHRKTRSANAFFSFFMAVGNVLGYAAGSYSGLHHVFPFTKTKACDVYCANLKSCFFLSIALLLTLATVALSYVKENQLGSDKGSNGASEEEGSGSHGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGKAYDRGVRAGALGLMLNSVVLGATSLGVEVLARGVGGVKRLWGIVNFLLAICLAMTVLVTKLAQHNRQYTLLPNAHHEPLPPPAGVKAGALALFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMVVSVTSGPWDALFGGGNLPAFVVGAVAAAASGILSIILLPSPPPDLAKAATAAGGGFH 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02086 524 Gene3D MFS general substrate transporter like domains 29 517 IPR036259 -
Cca02g02086 524 PANTHER SUGAR TRANSPORTER 24 515 - -
Cca02g02086 524 SUPERFAMILY MFS general substrate transporter 35 509 IPR036259 -
Cca02g02086 524 TIGRFAM GPH_sucrose: sucrose/H+ symporter 31 510 IPR005989 GO:0005887|GO:0008515|GO:0015770
Cca02g02086 524 MobiDBLite consensus disorder prediction 1 22 - -
Cca02g02086 524 CDD MFS_SLC45_SUC 35 484 - -
Cca02g02086 524 Pfam MFS/sugar transport protein 43 250 - -
Cca02g02086 524 MobiDBLite consensus disorder prediction 1 18 - -
Cca02g02086 524 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 24 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02086 Cca-Chr2 40993290 40996602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02086 32 524 Sucrose Transporter Gene Family AT1G22710 70.341 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02086 K15378 - gmx:547679 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00928 08 21407734 21410876 Cca02g02086 02 40993290 40996602 PCT