Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02078 ATGCTATGCCTCAACTTGAAAAGAGAGAATATTATGGGAGTTTCTTCATCACTTGTTTCCCTCTCTTTGAAAGATCTGCTTCAGGGAACTGAAGAAAACAGAACTTCATCATATTTGTGGAGCAAAGTGTTGGCAGCACAAGCCAAGAAGGGTACAAAGAGAGGTGTTAGGAGGCCAAGAAGGATTTTGATGAAGAGAAGGGGTGCCTCTAGAAGAGGCTCCAATGGGATTCGGCGACGTGTCAGGACATTGAAGAGTCTTGTACCCAACAGTGACTCCTTGGGGTTGGATGGACTCTTCAGAGAAACAGCTAGTTACATATTGTCTTTGCAAACTAGAGTGAAAGTCATGCAGGTTATGGTTAAGGTATTGACAGGGTCTGATGAGGAGTGA 393 0.4402 MLCLNLKRENIMGVSSSLVSLSLKDLLQGTEENRTSSYLWSKVLAAQAKKGTKRGVRRPRRILMKRRGASRRGSNGIRRRVRTLKSLVPNSDSLGLDGLFRETASYILSLQTRVKVMQVMVKVLTGSDEE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02078 130 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 20 126 IPR044660 GO:0006355
Cca02g02078 130 PANTHER TRANSCRIPTION FACTOR UPBEAT1 20 126 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02078 58 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 58.333 2.02e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02078 - - ccaj:109814433 228.794